miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|119279737|gb|EE943163.1|EE943163 CTTGATGATCTGTAAGGGGACTTGCTAATTTGGGACTGTTAGGAAATACACACGTCCTTTGGACACGCTCCATCATTGGG
TGGGTAATAAGGTATACAGATGACGTGTGCTTTTTGTTTTTTTTTCTTCCCCCCCTTCAACCTCAATGGTATTCCTACAG
GGAATGGATAACCATTTTAACTGTATTTTTTGCAGCCCATACCTTCTTGGGAATACAATTGTCTAACTTTTTATTTTTGG
TCTGGCTGTTGTGGTGTGCAAAACCCTGTACATTGCTATTTTGCCACACTGCAACACCTTACAGATGTGGAAGATGTGAA
ATTTTTCATCAATTATGACTACCCTAACTCCTCAGAGGATTATATTCATCGAATTGGAAGAACTGCTCGCAGTACCAAAA
CAGGCACAGCATACACTTTCTTTACACCTAATAACATAAAGCAAGTGAGCGACCTTATCTCTGTGCTTCGGGAAGCTAAT
CAAGCAATTAATCCTAAGTTGCTTCAGTTGGTCGAAGACAGAGGTTCAGGTCGTTCCAGGGGTAGAGGAGGCATGAAGGA
TGACCGGCGGGACAGATACTCTGCGGGCAAGAGGGGTGGATTTAATACATTTA




Most similar to sp|Q5R4I9|DDX5_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5
           OS=Pongo abelii GN=DDX5 PE=2 SV=1
          Length = 614

 Score =  159 bits (403), Expect = 1e-38
 Identities = 82/103 (79%), Positives = 82/103 (79%)
 Frame = +1

Query: 304 DVEDVKFFINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 483
           DVEDVKF INYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 465

Query: 484 AINPKLLQLVEXXXXXXXXXXXXXXXXXXXXYSAGKRGGFNTF 612
           AINPKLLQLVE                    YSAGKRGGFNTF
Sbjct: 466 AINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTF 508