miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|119557118|gb|EH158113.1|EH158113 TGTGTGGCCAGAATTTTGAACTTCTGATAAGTGTGTAACGCAAAGGACCATGTACATTTTTGTTGAAAGGTCCTCAAAAT
GAGAGCACACGAGGAGGTTGCTGTGAACTTTTAAGTGGCCCTACTGCGCAGAAGCATTCAGATGTCACTTGATGATCTGT
AAGGGGACTTGCTAATTTGGGACTGTTAGGAAATACACACGTCCTTTGGACACGCTCCATCATTGGGTGGGTAATAAGGT
ATACAGATGACGTGTGCTTTTTGTTTTTTTTTCTTCCCCCCCTTCAACCTCAATGGTATTCCTACAGGGAATGGATAACC
ATTTTAACTGTATTTTTTGCAGCCCATACCTTCTTGGGAATACAATTGTCTAACTTTTTATTTTTGGTCTGGCTGTTGTG
GTGTGCAAAACCCTGTACATTGCTATTTTGCCACACTGCAACACCTTACAGATGTGGAAGATGTGAAATTTGTCATCAAT
TATGACTACCCTAACTCCTCAGAGGATTATATTCATCGAATTGGAAGAACTGCTCGCAGTACCAAAACAGGCACAGCATA
CACTTTCTTTACACCTAATAACATAAAGCAAGTGAGCGACCTTATCTCTGTGCTTCGGGAAGCTAATCAAGCAATTAATC
CTAAGTTGCTTCAGTTGGTCGAAGACAGAGGTTCAGGTCGTTCCAGGGGTAGAGGAGGCATGAAGGATGACCGGCGGGAC
AGATACTCTGCGGGCAAGAGGGGTGGATTTTATACATTTAGAGACAGGGAAAAT




Most similar to sp|Q5R4I9|DDX5_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5
           OS=Pongo abelii GN=DDX5 PE=2 SV=1
          Length = 614

 Score =  169 bits (427), Expect = 3e-41
 Identities = 87/108 (80%), Positives = 87/108 (80%)
 Frame = +1

Query: 451 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 630
           DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 465

Query: 631 AINPKLLQLVEXXXXXXXXXXXXXXXXXXXXYSAGKRGGFYTFRDREN 774
           AINPKLLQLVE                    YSAGKRGGF TFRDREN
Sbjct: 466 AINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFRDREN 513