miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|119686717|gb|EH206638.1|EH206638 GTTGTAAGGTCTTGGCAAGACAAGCAGTGTGGCCAGAATTTTGAACTTCTGATAAGTGTGTAACGCAAAGGACCATGTAC
ATTTTTGTTGAAAGGTCCTCAAAATGAGAGCACACGAGGAGGTTGCTGTGAACTTTTAAGTGGCCCTACTGCGCAGAAGC
ATTCAGATGTCACTTGATGATCTGTAAGGGGACTTGCTAATTTGGGACTGTTAGGAAATACACACGTCCTTTGGACACGC
TCCATCATTGGGTGGGTAATAAGGTATACAGATGACGTGTGCTTTTTGTTTTTTTTTCTTCCCCCCCTTCAACCTCAATG
GTATTCCTACAGGGAATGGATAACCATTTTAACTGTATTTTTTGCAGCCCATACCTTCTTGGGAATACAATTGTCTAACT
TTTTATTTTTGGTCTGGCTGTTGTGGTGTGCAAAACCCTGTACATTGCTATTTTGCCACACTGCAACACCTTACAGATGT
GGAAGATGTGAAATTTGTCATCAATTATGACTACCCTAACTCCTCAGAGGATTATATTCATCGAATTGGAAGAACTGCTC
GCAGTACCAAAACAGGCACAGCATACACTTTCTTTACACCTAATAACATAAAGCAAGTGAGCGACCTTATCTCTGTGCTT
CGGGAAGCTAATCAAGCAATTAATCCTAAGTTGCTTCAGTTGGTCGAAGACAGAGGTTCAGGTCGTTCCAGGGGTAGAGG
AGGCATGAAGGATGACCGGCGGGACAGATACTCTGCGGGCAAGAGGGGTGGATTTAATACATTTAGAGACAGGGAAAATT
ATGACCGCGGTTAC




Most similar to sp|Q5R4I9|DDX5_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5
           OS=Pongo abelii GN=DDX5 PE=2 SV=1
          Length = 614

 Score =  184 bits (466), Expect = 8e-46
 Identities = 93/113 (82%), Positives = 93/113 (82%)
 Frame = +2

Query: 476 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 655
           DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 465

Query: 656 AINPKLLQLVEXXXXXXXXXXXXXXXXXXXXYSAGKRGGFNTFRDRENYDRGY 814
           AINPKLLQLVE                    YSAGKRGGFNTFRDRENYDRGY
Sbjct: 466 AINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGY 518