miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|12091632|gb|BF786596.1|BF786596 CACCGCGGGAGGCGCATGGCGGGCATGGCGCTGGCGCGAGCATGGAAGCAGATGTCCTGGTTCTACTACCAGTACCTGCT
GGTCACTGCGCTCTACATGCTGGAGCCCTGGGAGCGAACCGTGTTCAATTCGATGCTGGTTTCCGTGGTGGGGATGGCCC
TGTACACTGGCTACGTCTTCATGCCCCAGCACATCATGGCTATTCTGCATTACTTTGAAATTGTACAGTGACGAAGATGT
GACCAGGATCCAGAGGTTCCTGGGGAAGATCTGCCTTGTGAAGTTGGAATGAGACCTCATCAGATGTAAGATGTGCTACG
GATGTCCACGTGACCAACCTTATAAATACAAAGACTTTAAAAAAAACTTCATGAGTAGAACAGGAAAAATCATCCTGGCT
CATGTGTGTGTTCTTTCTTTTGATTTTAACAGAGGCTCTTATATAGTAGCTTTTATCTATTTTAACATTGTAGTCATTTG
TACTTGATATCAGTATTTTCTTAACCTTGTGACTGTTTCAATATTATCCAGTGAAAGCTTTTCTTAATGTAACTTTGAGT
ACATCTCAAATTGGCCTTCTATTTTTAAAACCTAAGGTCATTAGTTGGGCTTTACTGTTCTTGCTATCATATGGCATATA
CATCTGCTGGATATATTTCTACTCTTGACCAAAAGTTTGTTAAGAAAAAATACAGAATTTGGGGACGGGAGGGGGGATAC
TTTGAGAACTATTACAAAGATTTATCTGGTGGGTGAATCAGGTAAGGTTAGTCCCTAGACTTAAAGTTTGTTTAAATTAA
AGGT




Most similar to sp|Q4G019|SSPTA_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q4G019|SSPTA_RAT Small subunit of serine palmitoyltransferase A
          Length = 71

 Score =  134 bits (336), Expect = 1e-30
 Identities = 62/62 (100%), Positives = 62/62 (100%)
 Frame = +1

Query: 43  WKQMSWFYYQYLLVTALYMLEPWERTVFNSMLVSVVGMALYTGYVFMPQHIMAILHYFEI 222
           WKQMSWFYYQYLLVTALYMLEPWERTVFNSMLVSVVGMALYTGYVFMPQHIMAILHYFEI
Sbjct: 10  WKQMSWFYYQYLLVTALYMLEPWERTVFNSMLVSVVGMALYTGYVFMPQHIMAILHYFEI 69

Query: 223 VQ 228
           VQ
Sbjct: 70  VQ 71