miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|13711466|gb|BG189779.1|BG189779 CCAGGGCCTTTAATAAAACAAGAATGGNAAGNNCAGTTACAAGAAACTTTGCACTTGGNAAGNAAAAGGCANNACCCATT
GNATCAAAAAATCAACATGTTGTACAATGAGCTTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGACAAAAATGATGTTA
TTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACAATTTACCCGAGAAATATTTGACATGTACCAG
AATTATTCGTGCTATAAACACTGGCAATTTGAACTTCTGAATTATACACCAGCAGATTATGGTAGGCATATTGAGGAATT
TGCCTGTAGGAGATACTGAAAATTATTTTACCTCTGATCTTGATTAGAACCATATTGTCCCATTTTTTTTTTGAAACTTT
TGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGA
GAAGACAGTAGAAAGGAGGGAAGCATTTGCTTAGGGAGAAATATGTGAATTAGAGAAAATTCCCCTGAGGAACTTAGATA
CGTATCTTGCCTCAAAATTATTTTTCTCTATTATTGAAAGCAAAGGTATATTAAGGTTTTTACTTTAAATAACTTTATAA
AATAATATAAGTATTACTAATTAGA




Most similar to sp|O75570|RF1M_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O75570|RF1M_HUMAN Peptide chain release factor 1, mitochondrial
           OS=Homo sapiens GN=MTRF1 PE=1 SV=2
          Length = 445

 Score =  161 bits (407), Expect = 4e-39
 Identities = 78/90 (86%), Positives = 80/90 (88%)
 Frame = +1

Query: 34  QLQETLHLXXKRXXPLXQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQF 213
           QLQE   L  +    + QKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQF
Sbjct: 147 QLQE---LALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQF 203

Query: 214 TREIFDMYQNYSCYKHWQFELLNYTPADYG 303
           TREIFDMYQNYSCYKHWQFELLNYTPADYG
Sbjct: 204 TREIFDMYQNYSCYKHWQFELLNYTPADYG 233