miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|141303671|gb|AV580657.1|AV580657 TAGGCCTCGGTGCGGGCTGTGTGCGAGCGGGGCCGGGCTGGGCCGGGGCTGGGCGCAGGTGGGGAGGTCGCGGTCACATG
GCCGAGAGTGCTTGCGGGCCATGGGTCTGGTTGGGCCCGCAGACTCGGAGTGCGGGCCTGACCAGTCTCAAGACCTGCGT
GGTAACTCTGCAGGGACGGCCTCAGGAGGCAGAACGACGCCGGCGAGTTTGTGGACCTGTACGTGCCGCGGAAATGCTCC
GCAAGCAACCGCATCATTGCTGCCAAGGACCACGCGTCCATCCAGATGAACGTGGCCGAGGTTGATAGGACCACAGGCCG
GTTTAATGGCCAGTTTAAAACCTATGGCATCTGCGGGGCCATTCGCAGGATGGGCGAGTCAGATGATTCTATTCTCCGAT
TGGCTAAGGCTGATGGAATTGTCTCAAAGAACTTTTGAGCAGAAGAAATCGGGAA




Most similar to sp|Q9CQR2|RS21_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9CQR2|RS21_MOUSE 40S ribosomal protein S21 OS=Mus musculus
           GN=Rps21 PE=2 SV=1
          Length = 83

 Score =  166 bits (420), Expect = 5e-41
 Identities = 82/82 (100%), Positives = 82/82 (100%)
 Frame = +1

Query: 190 QNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIRR 369
           QNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIRR
Sbjct: 2   QNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIRR 61

Query: 370 MGESDDSILRLAKADGIVSKNF 435
           MGESDDSILRLAKADGIVSKNF
Sbjct: 62  MGESDDSILRLAKADGIVSKNF 83