miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|141312494|gb|AV586512.1|AV586512 GTGCGAGCGGGGCCGGGCTGGGCCGGGCTGGGCGCAGTTGGGGAGGTCGCGGTCACATGGCCGAGAGTGCTTGCGGGCCA
TGGGTCTGGTTGGGCCCGCAGACTCGGAGTGCGGGCCTGACCAGTCTCAAGACCTGCGTGGTAACTCTGCAGGGACGGCC
TCAGGATGCAGAACGACGCCGGCGAGTTTGTGGAGCTGTACGTGCCGCGGAAATGCTCCGCAAGCAACCGCATCATTGCT
GCCAAGGACCACGCGTCCATCCAGATGAACGTGGCCGAGGTTGATAGGACCACAGGCCGGTTTAATGGCCAGTTTAAAAC
CTATGGCATCTGCGGGGCCATTCGCAGGATGGGCGAGTCAGATGATTCTATTCTCCGATTGGCTAAGGCTGATGGAATTG
TCTCAAAGAACTTTTGAGCAGAAGAAATCGGGAATTTGT




Most similar to sp|Q9CQR2|RS21_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9CQR2|RS21_MOUSE 40S ribosomal protein S21 OS=Mus musculus
           GN=Rps21 PE=2 SV=1
          Length = 83

 Score =  166 bits (421), Expect = 4e-41
 Identities = 82/83 (98%), Positives = 83/83 (100%)
 Frame = +1

Query: 166 MQNDAGEFVELYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIR 345
           MQNDAGEFV+LYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIR
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIR 60

Query: 346 RMGESDDSILRLAKADGIVSKNF 414
           RMGESDDSILRLAKADGIVSKNF
Sbjct: 61  RMGESDDSILRLAKADGIVSKNF 83