miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|145899298|gb|ES404880.1|ES404880 TCGAGTAGTCGGACGTTACCCATTTCACGATTCTGATCCGAGCACACTATTTAGTAAAATCCGTAAAGGCCAGTACAGTA
TTCCTCCGATGTTGTCGGTGAAGGCTAAATGTCTTATAAAAAGTCTGTTGCGTCGAGATCCAGACGATAGACTGACTGCC
GGAGATGCTCTCCAACACCCATGGATTAATGGGAAACAGTCACCTGGTTTTATGACAATCTTGGATCACAAACATAGTGA
CCAAACTGTTCCAAGCGTGGTATTTAATGGAGAAGAAGAAGAGTTCTTTCTCTGAACAATATTGTCGTTAGCATTCAGTT
GAATTTCAAGCGCCAGTGTTATTTTGTTTATTTATTTGGAGTGACTTTTATTCAAGTATAGACATCTCTGTCGAAAAAAG
ACAGCTACGGGTAGAAATGATTATTAAGAACGAACTTTGAATGGTTGTTAACTGACATTCTGTCCATGTTTTAATGGCAG
CTTTATAATCGAAGAAAAAAACTATATAAATTAATCTAATAGCAAAAGTTATTTTGACAGTGCAATGCTGGCATGCTGAG
CACAGCCCTGCACTTTAATACGTTGTTTTTATTACACTTTGTTTGAATTAACTGTGATAAGCATATGTTAATTGGTCAGT
GAATCCATACAGTAGGTGGCTGGTTAAAAAAAGTTAGAGAATGAAAATTGGTGTGGTGATTTTTTTCACAGTCAAGTTAG
ACCAAGTGTAATTTTAAAAGCAATAAGAATTTTCCAAAAAATTATGTGTTATGGAAAAGTATTTTTTTTTAAAAACATTT
TTACGTGGCGAAGGGGGCCCTCTTTCGTAATCCTTTATCCCAAAAATCCATCCAATTCCCCTCGGTTTAAATGGTTTTTC
AAAGGGTATGCCCCCCTCCCAAAGGGAAAAAATCTCCATTTTTAGGGGGTTTGTTCCCCATTGGAGGGGGAAGGGGGGGA
TTTTTTAAAATTTTGGGGGGTGGGCGGGGGGGTTTTTAAACCTTAAAAAAGGTTTTTTTTTTTTTTGAAAA




Most similar to sp|Q96RU8|TRIB1_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q96RU8|TRIB1_HUMAN Tribbles homolog 1 OS=Homo sapiens GN=TRIB1
           PE=1 SV=2
          Length = 372

 Score =  101 bits (252), Expect = 8e-21
 Identities = 49/83 (59%), Positives = 61/83 (73%)
 Frame = +2

Query: 5   VVGRYPFHDSDPSTLFSKIRKGQYSIPPMLSVKAKCLIKSLLRRDPDDRLTAGDALQHPW 184
           +VGRYPFHDSDPS LFSKIR+GQ+ IP  +S KA+CLI+SLLRR+P +RLTA + L HPW
Sbjct: 278 LVGRYPFHDSDPSALFSKIRRGQFCIPEHISPKARCLIRSLLRREPSERLTAPEILLHPW 337

Query: 185 INGKQSPGFMTILDHKHSDQTVP 253
                 PG++   +   SDQ VP
Sbjct: 338 FESVLEPGYID-SEIGTSDQIVP 359