miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|151285298|gb|EV191962.1|EV191962 AAGCAATAGATATATTCCCTTTACCTCTCTCTAGGAGGAACTATGTTCATAGCTAACAACAAAATGAATCCTGTCTCTTC
CCTCATTATTTCCCTTACCTAGTTTACATCTTGATCAAAAGTAATATATGTAGTCCAATGTATTGAACTACTCAACCACA
TAATCTCACTAGAGATGGTGTGCTAGTACTTCAATAGATTGGACTACATACGTTACACTTCACCAAGACATTTCTCCAAC
AACAAAAAAACAACATAAAACCAACTATTCATCCAGAGATTCTCGATAGGTTTTCTTCTTAGATAAAATGGTTGCGGAAT
GCATGGAACATCTTTGGGGAGAGAAGCAGTAGGAAGGCTAGAACCGAACCGAAGAACATCTTCATTATGTAACCGAAAGC
GTCTGATGACTCGCTATCCTCTGAGACACCAGCACTTGGTGGGTTCACCATTGCTTCTGCTGAAGGAAGCGACTCTATCA
CTGCATCAGCCAAGTCGGTGATGAAGGATGGCGTCAGACCTAGCGCCGGGACACGCCCCCAGTTCTCTATCCCTGACTCC
AAAGCTAGCTCCCTGTACTCCATGTCTATCTCTTCAAGCGTCTCAATGTGCTCACTCACAAAACTGACTGGAACGGCTAG
TAGACTCTTGACACCATTCTTACCAAGGTCGACAAGAACCTCATCAGTGTATGGCTTCAGCCATTGAACAGGCCCAACAC
GACTCTGGTAAGCCAAGATATGGTTGTTTTG




Most similar to sp|P42043|HEMH1_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P42043|HEMH1_ARATH Ferrochelatase-1, chloroplastic/mitochondrial
           OS=Arabidopsis thaliana GN=HEM15 PE=2 SV=1
          Length = 466

 Score =  263 bits (672), Expect = 9e-70
 Identities = 132/146 (90%), Positives = 139/146 (95%)
 Frame = -1

Query: 748 NNHILAYQSRVGPVQWLKPYTDEVLVDLGKNGVKSLLAVPVSFVSEHIETLEEIDMEYRE 569
           N+H LAYQSRVGPVQWLKPYTDEVLVDLGK+GVKSLLAVPVSFVSEHIETLEEIDMEYRE
Sbjct: 320 NDHKLAYQSRVGPVQWLKPYTDEVLVDLGKSGVKSLLAVPVSFVSEHIETLEEIDMEYRE 379

Query: 568 LALESGIENWGRVPALGLTPSFITDLADAVIESLPSAEAMVNPPSAGVSEDSESSDAFGY 389
           LALESG+ENWGRVPALGLTPSFITDLADAVIESLPSAEAM NP +   SEDSESSDAF Y
Sbjct: 380 LALESGVENWGRVPALGLTPSFITDLADAVIESLPSAEAMSNPNAVVDSEDSESSDAFSY 439

Query: 388 IMKMFFGSVLAFLLLLSPKMFHAFRN 311
           I+KMFFGS+LAF+LLLSPKMFHAFRN
Sbjct: 440 IVKMFFGSILAFVLLLSPKMFHAFRN 465