miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|152138632|gb|EV461124.1|EV461124 AATCTTGCCNTTCAGCGACCGAGCAGAGGAGTTTCGCCGCATTAACTGCGAGGTCATCGGCTGCTCTATTGACTCCCACT
TCACCCACTTGGCATGGATCAACACTTCAAGGAAACAGGGAGGGCTGGGTAATATGAAAATCCCCCTTGTTGCAGACCTC
ACAAAGTCCATTTCCAGAGCTTACGGCGTGTTGAAGGAGGATGACGGCATTGCATTCAGGGGTTTGTTTGTGATCGACGA
TAAGGGGGTCTTGCGGCAGATCACCATCAACGACTTGCCCGTGGGTCGCTCCGTGGATGAGACTCTGCGTCTGGTGCAAG
CCTTCCAGCACACCGACAAATATGGAGAGGTTTGTCCTGCCGGCTGGAAGCCTGGGAGCGACACGATCGTCCCCGACGTG
GAGAAGAGCATAGCTTTCTTCTCCAAGCAGTAGATTCCCAAGAGCTTCTGTCCATCTGATCCTTCGTGAGCTCAGCACTT
GGTTTTTTTATTATTTTTTTTTGGATCANGGGGTGTCCCTGTGAAGCACTAAAGCGTCCAGATTTTACCCCATTAGAACC
AACTATTCAACTTGTTAAAACTCCTCTGCAACTGTTTATCCTTGTATGTTCACGCTACAGTTGAATGGAATAACCTCATA
GTTCTCCGCACTGAAATTTTTATAGGGTTTTTTTTTTTCCCCTTCTTTTTTTTTTAAAAAGGTTAATTTTTTTTCCCCGG
TTTTCTTACCCCATGGGTTTCCCCCCTTTTTTAAAAAAATAAAAAAAACTTG




Most similar to sp|Q90384|TDX_CYNPY

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q90384|TDX_CYNPY Peroxiredoxin OS=Cynops pyrrhogaster PE=2 SV=1
          Length = 200

 Score =  246 bits (629), Expect = 1e-64
 Identities = 115/143 (80%), Positives = 131/143 (91%)
 Frame = +2

Query: 2   ILPFSDRAEEFRRINCEVIGCSIDSHFTHLAWINTSRKQGGLGNMKIPLVADLTKSISRA 181
           I+ FSDRAEEFR+INCE+I  S+DSHF HLAW NTSRK+GGLG+MKIPLVAD  ++IS+ 
Sbjct: 56  IIAFSDRAEEFRKINCELIAASVDSHFCHLAWTNTSRKEGGLGSMKIPLVADTKRTISQD 115

Query: 182 YGVLKEDDGIAFRGLFVIDDKGVLRQITINDLPVGRSVDETLRLVQAFQHTDKYGEVCPA 361
           YGVLKED+GI+FRGLF+IDDKG+LRQITINDLPVGRSVDETLRLVQAFQHTDK+GEVCPA
Sbjct: 116 YGVLKEDEGISFRGLFIIDDKGILRQITINDLPVGRSVDETLRLVQAFQHTDKFGEVCPA 175

Query: 362 GWKPGSDTIVPDVEKSIAFFSKQ 430
           GWKPGSDTI PD+ KS  +FSKQ
Sbjct: 176 GWKPGSDTIKPDISKSKEYFSKQ 198