miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|156610571|gb|EW982421.1|EW982421 GAGTGTCAAAACAAAAGAAGGTAAACCCTTTATTTTCTTCTCAGTATACATCACATAATCAACAAAAAAAGAACATTCTA
CAGTACTTTAAAAAAAGGAGTTTAGAAAACAATAATTATACAAATCAGATTTGCCCAACGAGTCTCTAAATTGCAGTGGA
AGGCCTGGCTGGGCAGAAGTCCATATTAAAAAAGACACAAAACAAGAGAAAGCAGATAAAAACAATATGCTGATAACCAG
CTTCTTATGTTTGTGACCAAACAGTAGACGCATTGATCAAAGTATTAAAGACTAAACGTGAAAACACACATGGAGAACGG
TCAGCGCTGCTTTTAGAGCATCTGTACAGTCGCTCCTTTCAAGGCAAAGCCAGAATTTTCCTGGATGTGTGGCGCCACTG
GCCTTTGGCCACAGGAGGAGTGGGTGTCAGTAGAAGCCCCTCTCCAATGTAAGGTCCACTGGTGATAAGTAAAACCTAGC
TCCAGCTCCTATGGTGCTGCTTTGTGGAAGGTCAAGGGTCGATCTCCATGGGAACAACCGTTAGGATGGCGTCCTCATTT
CCACGGCGCACAACTACTCTCAAGGTGCCGTCCTGCTTGATGGCAGCAGTGACGTCATTCGCTGATGAGATCCTTTGGCC
GTTGATCGAGATGATGACGTCATGTTCTTTCAGCCCAGCAGTTGCAGCTGGTGTCTTTGCGATGACCTCCATAACGTAAG
CTCCAGAGGTGATGTCAGGGAAATCACGATGTCGAGTCTTCAGCTCTTTGGCCAGCGTTGGAGTCCCC




Most similar to sp|Q92743|HTRA1_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q92743|HTRA1_HUMAN Serine protease HTRA1 OS=Homo sapiens
           GN=HTRA1 PE=1 SV=1
          Length = 480

 Score =  124 bits (312), Expect = 6e-28
 Identities = 60/90 (66%), Positives = 73/90 (81%)
 Frame = -2

Query: 784 TPTLAKELKTRHRDFPDITSGAYVMEVIAKTPAATAGLKEHDVIISINGQRISSANDVTA 605
           T + AKELK RHRDFPD+ SGAY++EVI  TPA   GLKE+DVIISINGQ + SANDV+ 
Sbjct: 391 TSSKAKELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSD 450

Query: 604 AIKQDGTLRVVVRRGNEDAILTVVPMEIDP 515
            IK++ TL +VVRRGNED ++TV+P EIDP
Sbjct: 451 VIKRESTLNMVVRRGNEDIMITVIPEEIDP 480