miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|156613514|gb|EW985364.1|EW985364 GAGTGTCAAAACAAAAGAAGGTAAACCCTTTATTTTCTTCTCAGTATACATCACATAATCAACAAAAAAAGAACATTCTA
CAGTACTTTAAAAAAAGGAGTTTAGAAAACAATAATTATACAAATCAGATTTGCCCAACGAGTCTCTAAATTGCAGTGGA
AGGCCTGGCTGGGCAGAAGTCCATATTAAAAAAGACACAAAACAAGAGAAAGCAGATAAAAACAATATGCTGATAACCAG
CTTCTTATGTTTGTGACCAAACAGTAGACGCATTGATCAAAGTATTAAAGACTAAACGTGAAAACACACATGGAGAACGG
TCAGCGCTGCTTTTAGAGCATCTGTACAGTCGCTCCTTTCAAGGCAAAGCCAGAATTTTCCTGGATGTGTGGCGCCACTG
GCCTTTGGCCACAGGAGGAGTGGGTGTCAGTAGAAGCCCCTCTCCAATGTAAGGTCCACTGGTGATAAGTAAAACCTAGC
TCCAGCTCCTATGGTGCTGCTTTGTGGAAGGTCAAGGGTCGATCTCCATGGGAACAACCGTTAGGATGGCGTCCTCATTT
CCACGGCGCACAACTACTCTCAAGGTGCCGTCCTGCTTGATGGCAGCAGTGACGTCATTCGCTGATGAGATCCTTTGGCC
GTTGATCGAGATGATGACGTCATGTTCTTTCAGCCCAGCAGTTGCAGCTGGTGTCTTTGCGATGACCTCCATAACGTAAG
CTCCAGAGGTGATGTCAGGGAAATCACGATGTCGAGTCTTTAGCTCTTTGGCCAGCGTTGGAGTGAGAGTCATCATCCTC
ACACCGATATACTTCTTCTTAGCAGCCATTCTCCCTCTGGACAGCCTGTCGTAGGACTCTGTCAAGAACTCTCGAATTTT
ATCCGAGG




Most similar to sp|Q9R118|HTRA1_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9R118|HTRA1_MOUSE Serine protease HTRA1 OS=Mus musculus
           GN=Htra1 PE=2 SV=1
          Length = 480

 Score =  171 bits (433), Expect = 6e-42
 Identities = 81/124 (65%), Positives = 103/124 (83%)
 Frame = -3

Query: 886 SDKIREFLTESYDRLSRGRMAAKKKYIGVRMMTLTPTLAKELKTRHRDFPDITSGAYVME 707
           SDKI++FLTES+DR ++G+   KKKYIG+RMM+LT + AKELK RHRDFPD+ SGAY++E
Sbjct: 357 SDKIKKFLTESHDRQAKGKAVTKKKYIGIRMMSLTSSKAKELKDRHRDFPDVLSGAYIIE 416

Query: 706 VIAKTPAATAGLKEHDVIISINGQRISSANDVTAAIKQDGTLRVVVRRGNEDAILTVVPM 527
           VI  TPA   GLKE+DVIISINGQ + +ANDV+  IK++ TL +VVRRGNED ++TV+P 
Sbjct: 417 VIPDTPAEAGGLKENDVIISINGQSVVTANDVSDVIKKENTLNMVVRRGNEDIVITVIPE 476

Query: 526 EIDP 515
           EIDP
Sbjct: 477 EIDP 480