miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|157538503|gb|EX339734.1|EX339734 TTTTTTACTTAACCATACATATTATTCTCAGTAAACAAAGAAGACCTATTCACAATACACTACACAGACTGAGCAGCGAT
GCTGCTAAATGGAGATATACATCTTTTATATATATATATATAGGCATGGAGGGAAAACCGCGGATTATAGCGCACCATTA
TTTATATGGTATGTGTATCAGCAGAGTGGGACTTAAGCTGCGGAGGCTGCGATCTTCATTCCGGCAGGGCAGTGGCCGGG
AACACCGCAAATGAAGTAGTTAACGCCCCTACTCAGAGTAACTTTGTCGCTACCAGAAGTGAGAGGACGAAACCCTGCCG
TGCTACAGCTCCTGTACGCTCCGGCGTTCACTACCACCACGTTGTGCACTGATGTATTGTAATTAAACACCAGAGTGTCA
CCGGTCCTGAATCTTTTCCCAACAGTCCATGTCTTGCTCTGCAAATTCCAGCCCTGGCGACCCCCAACGACGTAGGTAGC
TCCCTTCACAAGATGCGCACATTGAATAACACAGAGGAGGAGGAGGAGCATACCCCCCACCAGCACATTTGCACTGCCTC
CTCCCTGGGCCATTCTTGCTT




Most similar to sp|P60496|BABL_LILLO

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
          Length = 126

 Score =  125 bits (315), Expect = 1e-28
 Identities = 63/127 (49%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
 Frame = -3

Query: 573 MAQGGGSANXXXXXXXXXXLCVIQCAHLVKGATYVVGGRQGWNLQSKTWTVGKRFRTGDT 394
           MAQG GSA             V  C  + +   Y VG   GW   +  W  GK FR GD 
Sbjct: 1   MAQGSGSAERALVLGVVLVFLVFNC-EVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGDV 59

Query: 393 LVFNYNTSVHNVVVVNAGAYRSCSTA-GFRPLTSGSDKVTLSRGVNYFICGVPGHCPAGM 217
           LVF YN +VHNVV V AG Y+SC+ + G R   SG D++TLSRG NYFIC VPGHC  G+
Sbjct: 60  LVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGL 119

Query: 216 KIAASAA 196
           KIA +AA
Sbjct: 120 KIAVTAA 126