miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|158125806|gb|DC527112.1|DC527112 TGAACAAGCGGCCTTTTCTAAACATCGACTTCTACTACTCTCTAGCCTTAAAATAACTTCTGCTTAGATCCAGGGCCCTT
CTACTGGAGATAGGAAAAGTAGAATTCAGGAATTAAAAGAATTACTCTTTACTCAATTTGAGGAACTTGGTGAAAGCCCC
TCCTCTTATGACAGCCAGGTTCCTGCTGTCTAGACCAGCCTATTCAGCGCTTTGCTAGGGGATCGGGTGGTCCACGCACT
CGCTAATACAGTTCTCCAGGTGTGGAATGATGTCAATACGATTGCTTGGCCTTTTCCCCCTGTGTCTTTGCTCGGTGCTC
TGGTTTCCTCAGCAACACTCCTTGTAAGGGGCAGAGACAGGGTCCACCAACTCCCCAAGATGAGGAAGCCCCTTCAGGCC
AGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGCAAGGCCGAGGAGGGTGGATCACTTGAGGTCAGGAGTTCGAGA
CCAGCCTGACCAACATGGCGAAACCTCGTCTCTACTAAAAATACAAAAATTAGCTTGGCATGGTGGTGCGTGCCTGTAAT
CCCAGCTACTCGGGAGGCTGGGGCAGGAGAATTGCTTGAACTTGGGAGATGGAGGCTGCAGCGAGCCAAGATCGTGCCAC
TGCACTCCAACCTGGGCAAGAAGTTTTTTTAAGACTCTTAAAAAAAGAACCTGGGCAATTTTTTTAAAACTCTGTCTTAA
AAAAAACT




Most similar to sp|Q6B4Z3|UTY_PANTR

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q6B4Z3|UTY_PANTR Histone demethylase UTY OS=Pan troglodytes GN=UTY
            PE=2 SV=1
          Length = 1079

 Score = 71.6 bits (174), Expect(2) = 5e-22
 Identities = 30/46 (65%), Positives = 35/46 (76%)
 Frame = -3

Query: 654  QVGVQWHDLGSLQPPSPKFKQFSCPSLPSSWDYRHAPPCQANFCIF 517
            + G+QW DL SLQPP P FK+FS  SLP+SW+YRH P C  NFCIF
Sbjct: 995  RAGMQWCDLSSLQPPPPGFKRFSHLSLPNSWNYRHLPSCPTNFCIF 1040



 Score = 53.9 bits (128), Expect(2) = 5e-22
 Identities = 29/42 (69%), Positives = 30/42 (71%)
 Frame = -1

Query: 527  FVFLVETRFRHVGQAGLELLTSSDPPSSALQSAGITGVSHRA 402
            F   VET F HVGQA LELLTS    +SA QSAGITGVSH A
Sbjct: 1037 FCIFVETGFHHVGQAHLELLTSGGLLASASQSAGITGVSHHA 1078


>sp|Q8N2A0|CX062_HUMAN Putative uncharacterized protein encoded by
           NCRNA00269 OS=Homo sapiens GN=NCRNA00269 PE=5 SV=1
          Length = 174

 Score =  102 bits (255), Expect = 2e-21
 Identities = 56/89 (62%), Positives = 62/89 (69%)
 Frame = -1

Query: 659 LPRLECSGTILARCSLHLXXXXXXXXXXSRVAGITGTHHHAKLIFVFLVETRFRHVGQAG 480
           LPRLECSGTI A  +L L          S+VA  T   HH +LIFVF VET F HVGQAG
Sbjct: 78  LPRLECSGTISAHYNLRLLGSSNSPVSASQVAETTEACHHTRLIFVFSVETGFHHVGQAG 137

Query: 479 LELLTSSDPPSSALQSAGITGVSHRAWPE 393
           L+LLTS DPP+SA QSAGITGVSH A P+
Sbjct: 138 LKLLTSGDPPASASQSAGITGVSHSARPK 166