miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|158832142|gb|EX828628.1|EX828628 CTGCTGCACCGCCCCCGGGGTCGTCCCCTCCCGCCCTCTCCTTCCACTGACGCAGTCCGTGCCGCACCAGCTCTAACATG
GCGGCGAGGCGCTGAGGAGCGCGGGGCGACGCGGGCCGCGAGCGGGTATTAAAATTTTCGAAGCCATGGGAGTAAAGGTC
CAGAGACCTCGTTGCTTTTTCGACATAGCCATCAACAATGTTCCTGCTGGAAGAGTGGTCTTTGAACTATTTTCTGATGT
GTGTCCAAAGACATGTGAGAATTTTCGCTGCCTTTGCACAGGTGAAAAGGGTACAGGAAAATCCACCCAAAAGCCATTGC
ATTACAAAAGTTGTCTATTTCACAGGGTAGTGAAAGATTTTATGATCCAAGGCGGTGACTTCAGTGAAGGAAATGGCAGG
GGAGGAGAATCCATTTATGGTGGCTTTTTTGAAGATGAAAGCTTTGCTGTAAAGCACAACAAAGAATTTCTTCTTTCAAT
GGCCAACCGAGGAAAGGATACAAATGGTTCACAGTTCTTTATAACTACTAAACCTACACCTCACTTAGATGGACATCATG
TTGTTTTTGGACAAGTCATCTCAGGTCAAGAAGTTGTGAGAGAAATAGAAAACCAGAAAACAGATGCATCTAGTAAACCA
TATGCTGAAGTACGCATACTGAGTTGCGGGGAGTTGATTCCAAAATCCAAAGCCAAGAAAGAAGACAAGAAAAGGCACAA
GTCGTCTTCCTCATCCAGCGACTCGGAAAGTTCAAGTGATTCAGAATCGTCTTCTGATTCATCATCAGATTCTGAGAGTG
CTTCAGAAGAGAAATCTAAAAAGCGAAAAAAGAAACACAAGAAAAATTCCAAGAAACATAAGAAGGAAAAAGAAAAAGAG
AAAGGAAAAGCAGGAAAAGTTCATCTAGTGAAAGTGAAGATGAAAACCCC




Most similar to sp|A2AR02|PPIG_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|A2AR02|PPIG_MOUSE Peptidyl-prolyl cis-trans isomerase G OS=Mus
           musculus GN=Ppig PE=1 SV=1
          Length = 752

 Score =  369 bits (947), Expect = e-101
 Identities = 174/179 (97%), Positives = 178/179 (99%)
 Frame = +2

Query: 146 MGVKVQRPRCFFDIAINNVPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHY 325
           MG+KVQRPRCFFDIAINN PAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHY
Sbjct: 1   MGIKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHY 60

Query: 326 KSCLFHRVVKDFMIQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTN 505
           KSCLFHRVVKDFM+QGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTN
Sbjct: 61  KSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTN 120

Query: 506 GSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDASSKPYAEVRILSCGELIP 682
           GSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDA+SKP+AEVRILSCGELIP
Sbjct: 121 GSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGELIP 179