miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|161491988|gb|EX195712.1|EX195712 GAAAACCCCACTTGCCCCCTCCTACTTACAACTCTGGTCAAACTCCTGTCTTTCACCTTGAGGAGCTCCCCACTGAAAGC
TGAACCCTGGGCTCCTCTATTCGGAAAATGCCTGCATTGAACAGTCCAACTTCAGAGCCCATTCTGCAGATAATACATTT
TTAGGGAGGCCTTATCTGAACCCACTAACAAATTCATGTTTGTTCTGCATTCCCTAGCATCTATGGCTCCTTCCAGGAAG
CGGGACATCGCCGCAGGAGCTTTCAGGGCTCTGATCGCTGGTACTGTAGCCAGTTTCATGACAGCCTGTATTGCGGGCAT
GCTCTCCAGCCCTCCCATGGAGATAGATTGCGACAGTCTTTTAGAAAAAGCCTTCAACTCAACTTCACCTAGCAACACAA
CTGAGCTAGTTACCTGTTGCCAAAACATATTTACCAGTATTGTCGCCAGCAACGCCAGTGATATTTTGCCAGCAAGCTTA
TCCACCTTGAAAGGCTGCTGTCTGGTGCTGAATCAAACTACATTTAACTGTGATTGGGTCGCTACCTCATTCTGAGCTTA
GCCTCTTCCCCAGATGATCCCCAGCACAGGCTTCAATCAATTTGAAAGGAACAGTGTGAAAATGAATCTACGTGATCACA
CTTCTTTATTGGGGGCGGNGGGGGGGGGGGGAGGANNNACTNTTGNGGGAGAAAATATAACCAGCTATTAATGACAATTT




Most similar to sp|Q9HAS3|S28A3_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9HAS3|S28A3_HUMAN Solute carrier family 28 member 3 OS=Homo
           sapiens GN=SLC28A3 PE=1 SV=1
          Length = 691

 Score =  147 bits (371), Expect = 7e-35
 Identities = 70/120 (58%), Positives = 93/120 (77%), Gaps = 3/120 (2%)
 Frame = +1

Query: 202 VLHSLASMAPSRKRDIAAGAFRALIAGTVASFMTACIAGMLSSPPMEIDCDSLLEKAFNS 381
           V+  L SMAPSRKRDIA+GA RALIAGTVA FMTACIAG+LSS P++I+C  +LE AFNS
Sbjct: 572 VIGGLTSMAPSRKRDIASGAVRALIAGTVACFMTACIAGILSSTPVDINCHHVLENAFNS 631

Query: 382 TSPSNTTELVTCCQNIFTSIVASNASDILPA---SLSTLKGCCLVLNQTTFNCDWVATSF 552
           T P NTT+++ CCQ++ +S VA    +++P    SL +LKGCC +LN +TFNC+ ++ +F
Sbjct: 632 TFPGNTTKVIACCQSLLSSTVAKGPGEVIPGGNHSLYSLKGCCTLLNPSTFNCNGISNTF 691