miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|166880197|gb|FD716467.1|FD716467 GCACTGACCCGGCAGCCTGCTGCTCAAGTCCGGCAGCAGTGACAAGCAACAAGCAACAGGCAACAAGCAACGGGCAACAA
TGTCTCAGAAGCCGAACTACAAAGTTGCGGACATTTCTCTGGCGGAGTGGGGACGCAAGGCCCTCGACATCGCTGAGAAT
GAGATGCCGGGCCTTATGAAGATGCGCCAGATGTACGGCAAGTCCAAGCCGCTGACCGGCGCCCGCATCTCTGGCTGCCT
CCACATGACGGTGCAGACGGCCGTTCTAATCGAGACGCTTGTGGAGCTGGGTGCCAAGGTGATGTGGTCGAGCTGCAACA
TCTTCTCCACGCAGGACCACGCCGCCGCTGCCATCGCCAAGGCCGGCATCCCTGTGTTCGCGTGGAAGGGCGAGACGGAC
GAGGAGTACTTGTGGTGCATCGAGCAGACGCTCATTTTCCCCGACGGGAAGCCGCTCAACATGATCCTGGACGATGGAGG
GGACCTCACCAACCTCGTGCACACAAAGCACCCCGAACTGCTGAAAGGCATTCGCGGCGTGTCTGAGGAGACGACCACGG
GCGTGCACAACCTCTACAAGATGCTCAAGAACAATGAGCTCAAGATCCCAGCCATCAACGTCAACGACTCCGTCACCAAG
AGCAAGTTCGACAACCTGTACGGGTGCCGCGAGTCACTGATCGACGGCATCAAGCGCGCCACAGACGTGATGATCGCCGG
AAAGGTGGCAGTGGTGGCCGGCTACGGCGACGTGGGCAAGGGCTCCGCGCAGTCGCTGCGCTCGTTCGGGGCACGTGTCA
TCATCACCGAGATCGACCCCATCAACGCGCTGCAGGCCGCCATGGAGGGCTACGAGGTGACGACGATGGACGAAGCCTGC
AAGGA




Most similar to sp|P10760|SAHH_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
           GN=Ahcy PE=1 SV=3
          Length = 432

 Score =  461 bits (1186), Expect = e-129
 Identities = 229/268 (85%), Positives = 241/268 (89%)
 Frame = +2

Query: 80  MSQKPNYKVADISLAEWGRKALDIAENEMPGLMKMRQMYGKSKPLTGARISGCLHMTVQT 259
           M+ K  YKVADI LA WGRKALDIAENEMPGLM+MR+MY  SKPL GARI+GCLHMTV+T
Sbjct: 1   MADKLPYKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVET 60

Query: 260 AVLIETLVELGAKVMWSSCNIFSTQDHXXXXXXXXGIPVFAWKGETDEEYLWCIEQTLIF 439
           AVLIETLV LGA+V WSSCNIFSTQDH        GIPVFAWKGETDEEYLWCIEQTL F
Sbjct: 61  AVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHF 120

Query: 440 PDGKPLNMILDDGGDLTNLVHTKHPELLKGIRGVSEETTTGVHNLYKMLKNNELKIPAIN 619
            DG PLNMILDDGGDLTNL+HTKHP+LL GIRG+SEETTTGVHNLYKM+ N  LK+PAIN
Sbjct: 121 KDG-PLNMILDDGGDLTNLIHTKHPQLLSGIRGISEETTTGVHNLYKMMANGILKVPAIN 179

Query: 620 VNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGSAQSLRSFGARV 799
           VNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKG AQ+LR FGARV
Sbjct: 180 VNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARV 239

Query: 800 IITEIDPINALQAAMEGYEVTTMDEACK 883
           IITEIDPINALQAAMEGYEVTTMDEACK
Sbjct: 240 IITEIDPINALQAAMEGYEVTTMDEACK 267