miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|166888621|gb|FD724402.1|FD724402 GCGGCAGCCTGCTGCTCAAGTCCGGCAGCAGTGACAAGCAACAAGCAACAGGCAACAAGCAACAGGCAACAATGTCTCAG
AAGCCGAACTACAAAGTTGCGGACATTTCTCTGGCGGAGTGGGGACGCAAGGCCCTCGACATCGCTGAGAATGAGATGCC
GGGCCTCATGAAGATGCGCCAGATGTACGGCAAGTCCAAGCCGCTGACCGGCGCCCGCATCTCTGGCTGCCTCCACATGA
CGGTGCAGACGGCCGTTCTAATCGAGACGCTTGTGGAGCTGGGTGCCAAGGTGATGTGGTCGAGCTGCAACATCTTCTCC
ACGCAGGACCACGCCGCCGCTGCCATCGCCAAGGCCGGCATCCCTGTGTTCGCGTGGAAGGGCGAGACGGACGAGGAGTA
CGTGTGGTGCATCGAGCAGACGCTCATTTTCCCCGACGGGAAGCCGCTCAACATGATCCTGGACGATGGAGGGGACCTCA
CCAACCTCGTGCACACAAAGCACCCCGAACTGCTGAAAGGCATTCGCGGCGTGTCTGAGGAGACGACCACGGGCGTGCAC
AACCTCTACAAGATGCTCAAGAACAATGAGCTCAAGATCCCAGCCATCAACGTCAACGACTCCGTCACCAAGAGCAAGTT
CGACAACCTGTACGGGTGCCGCGAGTCACTGATCGACGGCATCAAGCGCGCCACAGACGTGATGATCGCCGGAAAGGTGG
CAGTGGTGGCCGGCTACGGCGACGTGNGCAAGGGCTCCGCGCAGTCGCTGCGCTCGTTCGGGGCACGTGTCATCATCACC
GAGATCGACCCCATCAACGCGCTGC




Most similar to sp|O93477|SAHHB_XENLA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O93477|SAHHB_XENLA Adenosylhomocysteinase B OS=Xenopus laevis
           GN=ahcy-b PE=2 SV=1
          Length = 433

 Score =  426 bits (1095), Expect = e-118
 Identities = 204/251 (81%), Positives = 228/251 (90%)
 Frame = +3

Query: 72  MSQKPNYKVADISLAEWGRKALDIAENEMPGLMKMRQMYGKSKPLTGARISGCLHMTVQT 251
           MS K +YKVADISLA+WGRKA++IAENEMPGLMKMR+MY +SKPL GARI+GCLHMT+QT
Sbjct: 1   MSDKLSYKVADISLADWGRKAIEIAENEMPGLMKMREMYSESKPLKGARIAGCLHMTLQT 60

Query: 252 AVLIETLVELGAKVMWSSCNIFSTQDHXXXXXXXXGIPVFAWKGETDEEYVWCIEQTLIF 431
           AVLIETL  +GA+V WSSCNIFSTQDH        G+PV+AWKGETDEEY+WCIEQT+ F
Sbjct: 61  AVLIETLTAIGAEVQWSSCNIFSTQDHAAAAIAKTGVPVYAWKGETDEEYIWCIEQTIYF 120

Query: 432 PDGKPLNMILDDGGDLTNLVHTKHPELLKGIRGVSEETTTGVHNLYKMLKNNELKIPAIN 611
            DGKPLNMILDDGGDLTNLVHTK+P+LLKGI+G+SEETTTGVHNLYKM  +  L++PAIN
Sbjct: 121 KDGKPLNMILDDGGDLTNLVHTKYPQLLKGIKGISEETTTGVHNLYKMKSSGTLQVPAIN 180

Query: 612 VNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVXKGSAQSLRSFGARV 791
           VNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDV KG AQ+LR+FGARV
Sbjct: 181 VNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRAFGARV 240

Query: 792 IITEIDPINAL 824
           +ITEIDPINAL
Sbjct: 241 LITEIDPINAL 251