miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|166889421|gb|FD724877.1|FD724877 GCACTGCACCCGGCAGCCTGCTGCTCAAGTCCGGCAGCAGTGACAAGCAACAAGCAACAGGCAACAAGCAACAGGCAACA
ATGTCTCAGAAGCCGAACTACAAAGTTGCGGACATTTCTCTGGCGGAGTGGGGACGCAAGGCCCTCGACATCGCTGAGAA
TGAGATGCCGGGCCTTATGAAGATGCGCCAGATGTACGGCAAGTCCAAGCCGCTGACCGGCGCCCGCATCTCTGGCTGCC
TCCACATGACGGTGCAGACGGCCGTTCTAATCGAGACGCTTGTGGAGCTGGGTGCCAAGGTGATGTGGTCGAGCTGCAAC
ATCTTCTCCACGCAGGACCACGCCGCCGCTGCCATCGCCAAGGCCGGCATCCCTGTGTTCGCGTGGAAGGGCGAGACGGA
CGAGGAGTACGTGTGGTGCATCGAGCAGACGCTCATTTTCCCCGACGGGAAGCCGCTCAACATGATCCTGGACGATGGAG
GGGACCTCACCAACCTCGTGCACACAAAGCACCCCGAACTGCTGAAAGGCATTCGCGGCGTGTCTGAGGAGACGACCACG
GGCGTGCACAACCTCTACAAGATGCTCAAGAACAATGAGCTCAAGATCCCAGCCATCAACGTCAACGACTCCGTCACCAA
GAGCAAGTTCGACAACCTGTACGGGTGCCGCGAGTCACTGATCGACGGCATCAAGCGCGCCACAGACGTGATGATCGCCG
GAAAGGTGGCAGTGGTGGCCGGCTACGGCGACGTGGGCAAGGGCTCCGCGCAGTCGCTGCGCTCGTTCGGGGCACGTGTC
ATCATCACCGAGATCGACCCCATCAACGCGCTGCAGGCCGCCATGGAGGGCTA




Most similar to sp|O93477|SAHHB_XENLA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O93477|SAHHB_XENLA Adenosylhomocysteinase B OS=Xenopus laevis
           GN=ahcy-b PE=2 SV=1
          Length = 433

 Score =  440 bits (1131), Expect = e-123
 Identities = 211/257 (82%), Positives = 235/257 (91%)
 Frame = +3

Query: 81  MSQKPNYKVADISLAEWGRKALDIAENEMPGLMKMRQMYGKSKPLTGARISGCLHMTVQT 260
           MS K +YKVADISLA+WGRKA++IAENEMPGLMKMR+MY +SKPL GARI+GCLHMT+QT
Sbjct: 1   MSDKLSYKVADISLADWGRKAIEIAENEMPGLMKMREMYSESKPLKGARIAGCLHMTLQT 60

Query: 261 AVLIETLVELGAKVMWSSCNIFSTQDHXXXXXXXXGIPVFAWKGETDEEYVWCIEQTLIF 440
           AVLIETL  +GA+V WSSCNIFSTQDH        G+PV+AWKGETDEEY+WCIEQT+ F
Sbjct: 61  AVLIETLTAIGAEVQWSSCNIFSTQDHAAAAIAKTGVPVYAWKGETDEEYIWCIEQTIYF 120

Query: 441 PDGKPLNMILDDGGDLTNLVHTKHPELLKGIRGVSEETTTGVHNLYKMLKNNELKIPAIN 620
            DGKPLNMILDDGGDLTNLVHTK+P+LLKGI+G+SEETTTGVHNLYKM  +  L++PAIN
Sbjct: 121 KDGKPLNMILDDGGDLTNLVHTKYPQLLKGIKGISEETTTGVHNLYKMKSSGTLQVPAIN 180

Query: 621 VNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGSAQSLRSFGARV 800
           VNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKG AQ+LR+FGARV
Sbjct: 181 VNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRAFGARV 240

Query: 801 IITEIDPINALQAAMEG 851
           +ITEIDPINALQAAMEG
Sbjct: 241 LITEIDPINALQAAMEG 257