miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|166894280|gb|FD727237.1|FD727237 CTGACCCGGCAGCCTGCTGCTCAAGTCCGGCAGCAGTGACAAGCAACAAGCAACAGGCAACAAGCAACGGGCAACAATGT
CTCAGAAGCCGAACTACAAAGTTGCGGACATTTCTCTGGCGGAGTGGGGACGCAAGGCCCTCGACATCGCTGAGAATGAG
ATGCCGGGCCTTATGAAGATGCGCCAGATGTACGGCAAGTCCAAGCCGCTGACCGGCGCCCGCATCTCTGGCTGCCTCCA
CATGACGGTGCAGACGGCCGTTCTAATCGAGACGCTTGTGGAGCTGGGTGCCAAGGTGATGTGGTCGAGCTGCAACATCT
TCTCCACGCAGGACCACGCCGCCGCTGCCATCGCCAAGGCCGGCATCCCTGTGTTCGCGTGGAAGGGCGAGACGGACGAG
GAGTACGTGTGGTGCATCGAGCAGACGCTCATTTTCCCCGACGGGAAGCCGCTCAACATGATCCTGGACGATGGAGGGGA
CCTCACCAACCTCGTGCACACAAAGCACCCCGAACTGCTGAAAGGCATTCGCGGCGTGTCTGAGGAGACGACCACGGGCG
TGCACAACCTCTACAAGATGCTCAAGAACAATGAGCTCAAGATCCCAGCCATCAACGTCAACGACTCCGTCACCAAGAGC
AAGTTCGACAACCTGTACGGGTGCCGCGAGTCACTGATCGACGGCATCAAGCGCGCCACAGACGTGATGATCGCCGGAAA
GGTGGCAGTGGTGGCCGGCTACGGCGACGTGNGCAAGGGCTCCGCGCAGTCGCTGCGCTCGTTCGGGGCACGTGTCATCA
TCACCGAGATCGACCCCATCAACGCGCTGCAGGCCGCCATGGAGGGCTACGAGGTGACGACGATGGACGAAGCCTGCNAG




Most similar to sp|P10760|SAHH_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
           GN=Ahcy PE=1 SV=3
          Length = 432

 Score =  455 bits (1171), Expect = e-127
 Identities = 226/267 (84%), Positives = 239/267 (89%)
 Frame = +2

Query: 77  MSQKPNYKVADISLAEWGRKALDIAENEMPGLMKMRQMYGKSKPLTGARISGCLHMTVQT 256
           M+ K  YKVADI LA WGRKALDIAENEMPGLM+MR+MY  SKPL GARI+GCLHMTV+T
Sbjct: 1   MADKLPYKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVET 60

Query: 257 AVLIETLVELGAKVMWSSCNIFSTQDHXXXXXXXXGIPVFAWKGETDEEYVWCIEQTLIF 436
           AVLIETLV LGA+V WSSCNIFSTQDH        GIPVFAWKGETDEEY+WCIEQTL F
Sbjct: 61  AVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHF 120

Query: 437 PDGKPLNMILDDGGDLTNLVHTKHPELLKGIRGVSEETTTGVHNLYKMLKNNELKIPAIN 616
            DG PLNMILDDGGDLTNL+HTKHP+LL GIRG+SEETTTGVHNLYKM+ N  LK+PAIN
Sbjct: 121 KDG-PLNMILDDGGDLTNLIHTKHPQLLSGIRGISEETTTGVHNLYKMMANGILKVPAIN 179

Query: 617 VNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVXKGSAQSLRSFGARV 796
           VNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDV KG AQ+LR FGARV
Sbjct: 180 VNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARV 239

Query: 797 IITEIDPINALQAAMEGYEVTTMDEAC 877
           IITEIDPINALQAAMEGYEVTTMDEAC
Sbjct: 240 IITEIDPINALQAAMEGYEVTTMDEAC 266