miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|166920656|gb|FD748936.1|FD748936 AATGTATGATACTATCCGCGAATGGCCTCGTTATGTAAAGATTCCTTTCCCCATTGCCAAGGCATTGGCTTTTTCCCGAG
ATTTCTTATTAAATAAAGTTCCAGTTCCTCTTCCCACACCTCAGATATTCAATTTGGATGAGATCAATGCTCTGACTGTA
GATACATTGGTGTCTCCAACCGCTCTAACATTTGATGACCTTGGGCTAGTGCCTCATCAGCTGAAGGGTTATCCAATTGA
GTTCCTCATGTCTTACCGGAAGGGTGGACCAGGATTTGGCACTACAGTTAGCGAAAAAGTAACCGGAAACGAATTTGAGT
GAAAAACCTTCTATTTGGAGCAAAACAATGATCCAAATAAATGGGATGTTCATCATTTAGAGCTCTTAAGGGTTGGGCAT
GCTGACCTATGTGATTATTTGCGACGAAAGGGCTTGTAGATGTTTTGTACTCTTGTCAGAAATGTTAATTTTTGTTTTTA
TTTTATTTTTTCCAGTATAATGAGAAGATGGTAATCATGTTTTGGTACGAGAATAAGAATTTGGTTGGGACGCTTCCATG
AGCAATGAAAGAAAAC




Most similar to sp|Q9SK66|NDUA9_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9SK66|NDUA9_ARATH NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 9, mitochondrial OS=Arabidopsis
           thaliana GN=At2g20360 PE=2 SV=2
          Length = 402

 Score =  168 bits (426), Expect = 2e-41
 Identities = 77/100 (77%), Positives = 88/100 (88%)
 Frame = +2

Query: 2   MYDTIREWPRYVKIPFPIAKALAFSRDFLLNKVPVPLPTPQIFNLDEINALTVDTLVSPT 181
           MYD IREWPRYVK+PFPIAKA+A  RDF++NKVP PLP+PQIFNLD+INALT DTLVS  
Sbjct: 297 MYDMIREWPRYVKLPFPIAKAMAAPRDFMVNKVPFPLPSPQIFNLDQINALTTDTLVSDN 356

Query: 182 ALTFDDLGLVPHQLKGYPIEFLMSYRKGGPGFGTTVSEKV 301
           AL F DL LVPH+LKGYP+EFL+ YRKGGP FG+TVSEK+
Sbjct: 357 ALKFQDLDLVPHKLKGYPVEFLIQYRKGGPNFGSTVSEKI 396