miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|168522877|gb|DC647547.1|DC647547 GAGGGGGCTGGATGGGCAAGTCGGACGCGATGGCTCGAGCTCGGGCGGTGGCGGCTGTGGCCGGAGGCGGCGGTGCCTCC
TCCTCCTCGCCCCGGCGCCGGCGGTGATCGGAGCGAGCTGCCGCGGCCCCCGATGAGACTGCTGGTGGGCTGGCTGTGCC
TGAGCCTGGCGTCCGTGTGGCTGGCGCAGAGGATGTGGACGCTGCGGAGCCCGCTCACCCGCTCCCTGTACGTGAACATG
ACAAGCGGCCCGGGCGGGCCGGCGACGGCCGCGGGCGGCAGGAAGGAGAACGACCAGTGGTATGTGTGCAACAGAGAGAA
ATTATGCGAATCACTCCAGGCTGTCTTTGTTCAGAGTTACCTTGATCAAGGAACACAGATCTTCTTAAACAACAGCATTG
AGAAATCGGGCTGGCTATTTATCCAATTATATCATTCTTTTGTGTCATCTGTTTTTAGCCTGTTTATGTCTAGAACATCT
ATCAATGGGTTGCTAGGAAGAGGCTCAATGTTTGTGTTTTCACCAGATCAATTTCAGAGACTGCTTAAAATTAATCCAGA
CTGGAAAACCCACAGACTTCTTGATTTAGGTGCTGGAGATGGAGAAGTCACAAAAATCATGAGCCCTCATTTTGAAGAAA
TCTATGCCACTGAGCTTTCTGAAACTATGATATGGCAGCTTCAGAAAAAGAAATACAGAGTGCTTGGTATAAATGAATGG
CAGAATACAGGGCTCCAATATGATGTCATCAGCTGCCTGAACTTGCTGGACCGCTGTGATCAGCCCCTGACTTTGTTAAA
AGATATCAGAAGTGTCTTGGAGGCCAACTAGAGGCAGGGTTCATCCTGGCCCTGGTCTCCCCCTTTCATCCCTATGTGAA
AACGTAGGTGGCAGTGGGAGAAACCATCAGAAATTTGGAATCAAGGACGACTGGAGACAGTGATAGTCTGCTGAGTTTCA
GAAAGCTGTTTGTTATCGAAGCTTTCACAGACTGCATACCTGTTGTAGGCACTGTTTATTGACTCTACGTCTGGATGAGC
ATGCTTGTCAAACAGTTAAACCGGTGGGAGTTCGAAGTCT




Most similar to sp|Q9H1A3|METL9_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9H1A3|METL9_HUMAN Methyltransferase-like protein 9 OS=Homo
           sapiens GN=METTL9 PE=2 SV=1
          Length = 318

 Score =  425 bits (1092), Expect = e-118
 Identities = 218/262 (83%), Positives = 221/262 (84%), Gaps = 1/262 (0%)
 Frame = +1

Query: 133 MRLLVGWLCLSLASVWLAQRMWTLRSPLTRSLYVNMTSXXXXXXXXXXXRKENDQWYVCN 312
           MRLL GWLCLSLASVWLA+RMWTLRSPLTRSLYVNMTS           RKEN QWYVCN
Sbjct: 1   MRLLAGWLCLSLASVWLARRMWTLRSPLTRSLYVNMTSGPGGPAAAAGGRKENHQWYVCN 60

Query: 313 REKLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHXXXXXXXXLFMSRTSINGL 492
           REKLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYH        LFMSRTSINGL
Sbjct: 61  REKLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHSFVSSVFSLFMSRTSINGL 120

Query: 493 LGRGSMFVFSPDQFQRLLKINPDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMI 672
           LGRGSMFVFSPDQFQRLLKINPDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMI
Sbjct: 121 LGRGSMFVFSPDQFQRLLKINPDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMI 180

Query: 673 WQLQKKKYRVLGINEWQNTGLQYDVISCLNLLDRCDQPLTLLKDIRSVLEAN*RQGSSWP 852
           WQLQKKKYRVLGINEWQNTG QYDVISCLNLLDRCDQPLTLLKDIRSVLE   R      
Sbjct: 181 WQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQPLTLLKDIRSVLEPT-RGRVILA 239

Query: 853 WSPPFIPM*KR-RWQWEKPSEI 915
              PF P  +    +WEKPSEI
Sbjct: 240 LVLPFHPYVENVGGKWEKPSEI 261