miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|17155376|gb|BG930423.1|BG930423 ATCGACGGGGGGTCTTCTGCCGCGCAGTTTCGAATTTCCTGTTCCTCAGCTGTACAAATGGCATTGAGACGTATATCCAA
AGAGTCACAGGACTTAAGTGTAGATCCTCCAACCCAGTGTTCAGCTGGACCTATTCACGATGATCTATTTGCCTGGCAAG
CCACTATTATGGGACCTGCTGATAGTCCATATGAAGGTGGAGTCTTTTCCCTGAAAATACTATTTCCCACAGATTATCCT
TTCGACCCCCCATCC




Most similar to sp|P25867|UBCD1_DROME

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa
           OS=Drosophila melanogaster GN=eff PE=1 SV=1
          Length = 147

 Score =  110 bits (274), Expect = 4e-24
 Identities = 50/65 (76%), Positives = 54/65 (83%)
 Frame = +1

Query: 58  MALRRISKESQDLSVDPPTQCSAGPIHDDLFAWQATIMGPADSPYEGGVFSLKILFPTDY 237
           MAL+RI+KE QDL  DPP QCSAGP+ DDLF WQATIMGP DSPY+GGVF L I FPTDY
Sbjct: 1   MALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDY 60

Query: 238 PFDPP 252
           PF PP
Sbjct: 61  PFKPP 65