miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|17931099|gb|BM268059.1|BM268059 TTTTTTTTTTTTTTAGAAAACTTAACAGGGGTAACTGATTCATTAGCAATTATACAAATTCTACATTGTTGCACGAACAA
CCTAGCACAGTCCTAAATATGAGAAAATTTAGCAACGTGCGGCGGCGGCGGCACCCTAAGAGGATGTAAACTTGGTAACC
GCCTTGGTCCCTTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGAGGACGAGGCGCACCGAGGTCTGGATCTCCCGGGA
GGTGATGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCTGCCTCGGCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGG
AGTTCATGATGGACATGGCCTTGGACGAGATGCCAATGTCCGGGTGCACCTGCTTGAGCACCTTGAAGATGTAGATCTTG
TACGTCTCGACGCTCTTCTTCGCCTTCTTCTTTCCCTTCTTCTCGCCGCCCTCCTTGCTCGGCACGCGCTTCTCCGCCCT
TGGCTTCTTCTCGGCCTTCTCCTCCGCCGGCTTCTTCTCCGCGGGCTTCTTCTCGGCCTTGGGCGCCATCAGGAATCGAT
CAAATGGGGCGCGAAAGAGATGGTGGAAGGGGCGGCTTGGGAATTTGCTGGTGAGTGGCGGCGAGTGCTCGTAGCT




Most similar to sp|P54348|H2B5_MAIZE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P54348|H2B5_MAIZE Histone H2B.5 OS=Zea mays PE=2 SV=3
          Length = 154

 Score =  154 bits (390), Expect = 4e-37
 Identities = 82/92 (89%), Positives = 82/92 (89%)
 Frame = -1

Query: 414 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFXXXXXXXXXXARYNKKPTITSR 235
           SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIF          ARYNKKPTITSR
Sbjct: 63  SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSR 122

Query: 234 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 139
           EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 123 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 154