| EST name | EST sequence |
| gi|182660355|gb|FF554833.1|FF554833 | GGAAAGCTTGGAAAACCCTCTCTTCCCTGTCCCTAAGAATTGGGAGAGAGTAATTTGGTCTATAGCAACTCAATTCAACC CATCAATCCCACACCATGCAGGCCAGTGATAGGTTTAACATCAACTCTCAGCTCGAGCATCTCCAAGCCAAATATGTTGG AACTGGTCATGCCGATATGAACAGATTTGAGTGGGCAGTGAACATTCAGCGTGATAGCTATGCGTCATACATTGGCCACT ACCCTTTACTGGCATACTTTTCTATTGCTGAAAATGAATCTATTGGAAGGGAACGCTATAGTTTTATGCAGAAAATGCTC CTGCCTTGTGGATTACCTCCCGAAAGAGAAGATGATTAATCACAAGTACAGTTTATGTAGTATTTGACAATGTATTGTGT TGTGTTTGTTATCTGATAGAGTAAACAGATGGTTGTCCTTGATTACGTATTGTAGTGATATTTCTTTAGCTTGTGGATGC TTAAGTAGTTGTTATGGAGTTTGAAAATTTTTCAAAATATGTTTAGTTTATTGTTCAATCATAATTTTGTCTGTGTTTCT TAAATGGTGCCCTTTAGATTGAACGAACCTTGTATTCGCAACGGATTTTA |
Most similar to sp|P58728|SF3BB_ARATH
>>sp|P15192|CB22_PINSY Chlorophyll a-b binding protein type 2 member
2 (Fragment) OS=Pinus sylvestris PE=2 SV=1
Length = 150
Score = 160 bits (406), Expect(2) = 4e-49
Identities = 85/117 (72%), Positives = 94/117 (80%), Gaps = 1/117 (0%)
Frame = +2
Query: 371 VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGV 550
V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ QV+LMGL+EG+R+ G +
Sbjct: 8 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGG-GPL 66
Query: 551 GEG-NNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQPSSPARG 718
GEG + LYP G FDPLGLADDP AELKVKEIKNGRLAMFSMFGFFVQ +G
Sbjct: 67 GEGLDPLYP-GDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 122
Score = 55.8 bits (133), Expect(2) = 4e-49
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +1
Query: 697 AIVTGEGPLENLLDHLDDPVANNAWVYAT 783
AIVTG+GP+ENL DHL DPVANNAW YAT
Sbjct: 116 AIVTGKGPIENLYDHLADPVANNAWAYAT 144
>sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26,
chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 160 bits (406), Expect(2) = 9e-44
Identities = 96/188 (51%), Positives = 117/188 (62%), Gaps = 4/188 (2%)
Frame = +2
Query: 146 WYGPDRVKYLGPF---SAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 316
WYGPDR +L ++ P YL GE GDYG+D GL PE FA+ +A E+IH RWA
Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121
Query: 317 MLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 496
MLGA G I PE L K+ E VWFK GA + L+Y G + +LAV+ +
Sbjct: 122 MLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-E 178
Query: 497 VILMGLVEGFRI-NGLDGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 673
V+L+G E +RI NGLD + L+PGG FDPLGLA DP A LKVKEIKNGRLAMF
Sbjct: 179 VVLLGGAEYYRITNGLD---FEDKLHPGGP-FDPLGLAKDPEQGALLKVKEIKNGRLAMF 234
Query: 674 SMFGFFVQ 697
+M GFF+Q
Sbjct: 235 AMLGFFIQ 242
Score = 37.7 bits (86), Expect(2) = 9e-44
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +1
Query: 697 AIVTGEGPLENLLDHLDDPVANN 765
A VTGEGP+ENL HL DP NN
Sbjct: 243 AYVTGEGPVENLAKHLSDPFGNN 265
>sp|P14584|CB21_RAPSA Chlorophyll a-b binding of LHCII type 1
protein (Fragment) OS=Raphanus sativus PE=2 SV=1
Length = 124
Score = 122 bits (307), Expect(2) = 7e-37
Identities = 66/97 (68%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Frame = +2
Query: 431 LDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNN-LYPGGQYFDPLGLA 607
LDYLGNP+LVHAQSILA+ QVILMG VEG+R+ G +GE + LYPGG FDPL
Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGS-FDPLASL 59
Query: 608 DDPVTFAELKVKEIKNGRLAMFSMFGFFVQPSSPARG 718
DP FAELKVKEIKNGRLAMFSMFGFFVQ +G
Sbjct: 60 TDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 96
Score = 52.8 bits (125), Expect(2) = 7e-37
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1
Query: 697 AIVTGEGPLENLLDHLDDPVANNAWVYAT 783
AIVTG+GPLENL DHL DPV NNAW +AT
Sbjct: 90 AIVTGKGPLENLADHLADPVNNNAWAFAT 118
>sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragment)
OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1
Length = 116
Score = 110 bits (274), Expect(2) = 3e-33
Identities = 62/90 (68%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = +2
Query: 452 NLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEG-NNLYPGGQYFDPLGLADDPVTFA 628
+LVHAQSILA+ QV+LMG VEG+RI G +GE + LYPGG FDPLGLA+DP FA
Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVVDPLYPGGS-FDPLGLAEDPEAFA 58
Query: 629 ELKVKEIKNGRLAMFSMFGFFVQPSSPARG 718
ELKVKEIKNGRLAMFSMFGFFVQ +G
Sbjct: 59 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 88
Score = 53.5 bits (127), Expect(2) = 3e-33
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 697 AIVTGEGPLENLLDHLDDPVANNAWVYAT 783
AIVTG+GPLENL DHL DPV NNAW YAT
Sbjct: 82 AIVTGKGPLENLADHLADPVNNNAWSYAT 110
>sp|P14275|CB2C_SOLLC Chlorophyll a-b binding protein 1C,
chloroplastic (Fragments) OS=Solanum lycopersicum
GN=CAB1C PE=3 SV=1
Length = 265
Score = 110 bits (274), Expect(2) = 4e-33
Identities = 62/90 (68%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = +2
Query: 452 NLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEG-NNLYPGGQYFDPLGLADDPVTFA 628
+LVHAQSILA+ QV+LMG VEG+RI G +GE + LYPGG FDPLGLA+DP FA
Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVVDPLYPGGS-FDPLGLAEDPEAFA 207
Query: 629 ELKVKEIKNGRLAMFSMFGFFVQPSSPARG 718
ELKVKEIKNGRLAMFSMFGFFVQ +G
Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Score = 52.8 bits (125), Expect(2) = 4e-33
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1
Query: 697 AIVTGEGPLENLLDHLDDPVANNAWVYAT 783
AIVTG+GPLENL DHL DPV NNAW +AT
Sbjct: 231 AIVTGKGPLENLADHLADPVNNNAWAFAT 259
>sp|P14274|CB2A_SOLLC Chlorophyll a-b binding protein 1A,
chloroplastic (Fragments) OS=Solanum lycopersicum
GN=CAB1A PE=3 SV=1
Length = 265
Score = 110 bits (274), Expect(2) = 4e-33
Identities = 62/90 (68%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = +2
Query: 452 NLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEG-NNLYPGGQYFDPLGLADDPVTFA 628
+LVHAQSILA+ QV+LMG VEG+RI G +GE + LYPGG FDPLGLA+DP FA
Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVVDPLYPGGS-FDPLGLAEDPEAFA 207
Query: 629 ELKVKEIKNGRLAMFSMFGFFVQPSSPARG 718
ELKVKEIKNGRLAMFSMFGFFVQ +G
Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Score = 52.8 bits (125), Expect(2) = 4e-33
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1
Query: 697 AIVTGEGPLENLLDHLDDPVANNAWVYAT 783
AIVTG+GPLENL DHL DPV NNAW +AT
Sbjct: 231 AIVTGKGPLENLADHLADPVNNNAWAFAT 259
>sp|P14277|CB2F_SOLLC Chlorophyll a-b binding protein 3B,
chloroplastic (Fragments) OS=Solanum lycopersicum
GN=CAB3B PE=3 SV=1
Length = 267
Score = 110 bits (274), Expect(2) = 8e-33
Identities = 62/90 (68%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = +2
Query: 452 NLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEG-NNLYPGGQYFDPLGLADDPVTFA 628
+LVHAQSILA+ QV+LMG VEG+RI G +GE + LYPGG FDPLGLA+DP FA
Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVVDPLYPGGS-FDPLGLAEDPEAFA 209
Query: 629 ELKVKEIKNGRLAMFSMFGFFVQPSSPARG 718
ELKVKEIKNGRLAMFSMFGFFVQ +G
Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 239
Score = 52.0 bits (123), Expect(2) = 8e-33
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +1
Query: 697 AIVTGEGPLENLLDHLDDPVANNAWVYAT 783
AIVTG+GPLENL DH+ DPV NNAW +AT
Sbjct: 233 AIVTGKGPLENLADHIADPVNNNAWAFAT 261
>sp|P14276|CB2E_SOLLC Chlorophyll a-b binding protein 3A,
chloroplastic (Fragments) OS=Solanum lycopersicum
GN=CAB3A PE=3 SV=1
Length = 267
Score = 110 bits (274), Expect(2) = 8e-33
Identities = 62/90 (68%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = +2
Query: 452 NLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEG-NNLYPGGQYFDPLGLADDPVTFA 628
+LVHAQSILA+ QV+LMG VEG+RI G +GE + LYPGG FDPLGLA+DP FA
Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVVDPLYPGGS-FDPLGLAEDPEAFA 209
Query: 629 ELKVKEIKNGRLAMFSMFGFFVQPSSPARG 718
ELKVKEIKNGRLAMFSMFGFFVQ +G
Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 239
Score = 52.0 bits (123), Expect(2) = 8e-33
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +1
Query: 697 AIVTGEGPLENLLDHLDDPVANNAWVYAT 783
AIVTG+GPLENL DH+ DPV NNAW +AT
Sbjct: 233 AIVTGKGPLENLADHIADPVNNNAWAFAT 261
>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
OS=Pisum sativum GN=lhca3 PE=1 SV=1
Length = 275
Score = 111 bits (278), Expect(2) = 1e-28
Identities = 85/222 (38%), Positives = 115/222 (51%), Gaps = 23/222 (10%)
Frame = +2
Query: 101 VAAAASGRITMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEA--- 271
V AAA+ + G G DR + S Q+ SYL G PGDYG+D GLS DPE
Sbjct: 40 VRAAATPPVKQG-----GVDRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGG 91
Query: 272 FARNRAL---EVIHGRWAMLGALGCITPEVLEKWVRVDFKEPV-WFKAGAQIFSEGGLDY 439
F R L EVI+GR+AMLGA+G I PE L K + + + WF+ G I G +Y
Sbjct: 92 FIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGV-IPPAGTYNY 150
Query: 440 LGNPNLVHAQSILAVLGF----------------QVILMGLVEGFRINGLDGVGEGNNLY 571
+ + +A++GF + +GL +GF G GN Y
Sbjct: 151 WADNYTLFVLE-MALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFG-------GSGNPAY 202
Query: 572 PGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQ 697
PGG +F+PLG D + ELK+KE+KNGRLAM ++ G+F+Q
Sbjct: 203 PGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQ 244
Score = 36.6 bits (83), Expect(2) = 1e-28
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 700 IVTGEGPLENLLDHLDDPVANN 765
+VTG GP +NLLDH+ DPV NN
Sbjct: 246 LVTGVGPYQNLLDHVADPVNNN 267
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21,
chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245
Score = 114 bits (284), Expect(2) = 2e-27
Identities = 78/202 (38%), Positives = 100/202 (49%), Gaps = 2/202 (0%)
Frame = +2
Query: 107 AAASGRITMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNR 286
A SGR+TM + + G R P++L G PGD+G+D GL+ PE F R +
Sbjct: 36 ATTSGRVTMSAEWFPGQPR-----------PAHLDGSSPGDFGFDPLGLATVPENFERFK 84
Query: 287 ALEVIHGRWAMLGALGCITPEVLE--KWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLV 460
E+ H RWAML G + PE L WV K W +G YLGNP V
Sbjct: 85 ESEIYHCRWAMLCVPGVLVPEALGLGNWV----KAQEW-----AALPDGQATYLGNP--V 133
Query: 461 HAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNNLYPGGQYFDPLGLADDPVTFAELKV 640
++ +L + + + E R D YPGG FDPLG + DP F ELK+
Sbjct: 134 PWGNLPTILAIEFLAIAFAEQQRTMEKD---PEKKKYPGGA-FDPLGFSKDPAKFEELKL 189
Query: 641 KEIKNGRLAMFSMFGFFVQPSS 706
KEIKNGRLAM + GF VQ S+
Sbjct: 190 KEIKNGRLAMLAFVGFCVQQSA 211
Score = 29.6 bits (65), Expect(2) = 2e-27
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +1
Query: 709 GEGPLENLLDHLDDPVANN 765
G GPLENL HL DP NN
Sbjct: 214 GTGPLENLATHLADPWHNN 232
>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
Length = 273
Score = 103 bits (256), Expect(2) = 5e-27
Identities = 84/224 (37%), Positives = 112/224 (50%), Gaps = 25/224 (11%)
Frame = +2
Query: 101 VAAAASGRITMG--NDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEA- 271
V AA++ + G LW+ S Q+ SYL G PGD+G+D GLS DPE
Sbjct: 39 VRAASTPPVKQGANRQLWFA----------SKQSLSYLDGRLPGDFGFDPLGLS-DPEGT 87
Query: 272 --FARNRAL---EVIHGRWAMLGALGCITPEVLEKWVRVDFKEPV-WFKAGAQIFSEGGL 433
F + L EVI+GR+AMLGA G I PE+L K + + + WF+ G +
Sbjct: 88 GGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGV-------I 140
Query: 434 DYLGNPNLVHAQSILAVLGFQVILMGLVEGFRIN--------------GLD-GVG-EGNN 565
G N L VL ++ LMG E R GL+ G+G G+
Sbjct: 141 PPAGTYNYWADNYTLFVL--EMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDP 198
Query: 566 LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQ 697
YPGG F+PLG D + ELK+KEIKNGRLAM ++ G+F+Q
Sbjct: 199 AYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQ 242
Score = 39.3 bits (90), Expect(2) = 5e-27
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 697 AIVTGEGPLENLLDHLDDPVANN 765
A+VTG GP +NLLDHL DPV NN
Sbjct: 243 ALVTGVGPYQNLLDHLADPVNNN 265
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
Length = 246
Score = 107 bits (268), Expect(2) = 2e-25
Identities = 72/172 (41%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
Frame = +2
Query: 197 PSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEV--LEKWVR 370
PSYL G PGD+G+D+ GL P R + E+IH RWAML G I PE L WV
Sbjct: 56 PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWV- 114
Query: 371 VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGV 550
K W G YLG P V ++ +L + + + VE R D
Sbjct: 115 ---KAQEW-----AAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQRSMEKD-- 162
Query: 551 GEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQPSS 706
YPGG FDPLG + DP F ELKVKEIKNGRLA+ ++ GF VQ S+
Sbjct: 163 -SEKKKYPGGA-FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSA 212
Score = 29.6 bits (65), Expect(2) = 2e-25
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +1
Query: 709 GEGPLENLLDHLDDPVANN 765
G GPLENL HL DP NN
Sbjct: 215 GTGPLENLATHLADPWHNN 233
>sp|P12327|CB21_EUGGR Chlorophyll a-b binding protein of LHCII type
1 (Fragment) OS=Euglena gracilis PE=2 SV=1
Length = 127
Score = 96.3 bits (238), Expect(2) = 2e-24
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Frame = +2
Query: 455 LVHAQSILAVLGFQVILMGLVEGFRI-NGLDG-VGEG-NNLYPGGQYFDPLGLADDPVTF 625
L+HA+S+LA+L QV+LMG VEG+R N G GE + LYPGG FDPLGLADDP TF
Sbjct: 5 LIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGP-FDPLGLADDPDTF 63
Query: 626 AELKVKEIKNGRLAMFSMFGFFVQ 697
ELKVKEIKNGRLAM M GF+ Q
Sbjct: 64 PELKVKEIKNGRLAMSGMLGFYAQ 87
Score = 37.7 bits (86), Expect(2) = 2e-24
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1
Query: 697 AIVTGEGPLENLLDHLDDPVANN 765
AIVTGEGP+EN L HL DP A+N
Sbjct: 88 AIVTGEGPVENWLYHLQDPSAHN 110
>sp|Q01667|CAB6_ARATH Chlorophyll a-b binding protein 6,
chloroplastic OS=Arabidopsis thaliana GN=LHCA1 PE=1 SV=1
Length = 241
Score = 103 bits (258), Expect(2) = 2e-24
Identities = 82/229 (35%), Positives = 104/229 (45%), Gaps = 2/229 (0%)
Frame = +2
Query: 26 SRVLAAKTPFLGQGRAAANASPLRDVAAAASGRITMGNDLWYGPDRVKYLGPFSAQTPSY 205
S + ++K+ F+ G NA + GRI M G R P+Y
Sbjct: 17 SLLSSSKSKFVSAGVPLPNAGNV--------GRIRMAAHWMPGEPR-----------PAY 57
Query: 206 LTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVL--EKWVRVDF 379
L G PGD+G+D GL P R + E+IH RWAML G + PE L WV
Sbjct: 58 LDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWV---- 113
Query: 380 KEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEG 559
K W G YLGNP V ++ +L + + + VE R D
Sbjct: 114 KAQEW-----AALPGGQATYLGNP--VPWGTLPTILAIEFLAIAFVEHQRSMEKD---PE 163
Query: 560 NNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQPSS 706
YPGG FDPLG + DP ELKVKEIKNGRLA+ + GF VQ S+
Sbjct: 164 KKKYPGGA-FDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSA 211
Score = 29.6 bits (65), Expect(2) = 2e-24
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +1
Query: 709 GEGPLENLLDHLDDPVANN 765
G GPLENL HL DP NN
Sbjct: 214 GTGPLENLATHLADPWHNN 232
>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
OS=Petunia hybrida PE=2 SV=1
Length = 270
Score = 104 bits (259), Expect(2) = 5e-24
Identities = 81/242 (33%), Positives = 108/242 (44%), Gaps = 18/242 (7%)
Frame = +2
Query: 26 SRVLAAKTPFLGQGRAAANASPLRDVAAAASGRITMGNDLWYGPDRVKYLGPFSAQTPSY 205
S V A K FLG R + A R + + PDR + + P +
Sbjct: 25 SIVGATKASFLGGKRLRVSK-----FIAPVGSRSVAVSAVAADPDRPLWFP--GSTPPEW 77
Query: 206 LTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKE 385
L G PGD+G+D GL +DPE+ N E++H RWAMLGA G PE L K + V
Sbjct: 78 LDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTK-IGV-LNT 135
Query: 386 PVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEG-------------- 523
P W+ AG Q +Y + + +++L+G EG
Sbjct: 136 PSWYTAGEQ-------EYFTDTTTLFV--------IELVLIGWAEGRRWADIIKPGCVNT 180
Query: 524 ---FRINGLDGVGEGNNLYPGGQYFDPLGL-ADDPVTFAELKVKEIKNGRLAMFSMFGFF 691
F N L G G YPGG +FDPLG + P EL+ KEIKNGRLAM ++ G +
Sbjct: 181 DPIFPNNKLTGTDVG---YPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAW 237
Query: 692 VQ 697
Q
Sbjct: 238 FQ 239
Score = 28.1 bits (61), Expect(2) = 5e-24
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 700 IVTGEGPLENLLDHLDDP 753
I TG GP++NL HL DP
Sbjct: 241 IYTGTGPIDNLFAHLADP 258
>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
Length = 270
Score = 103 bits (257), Expect(2) = 8e-24
Identities = 80/242 (33%), Positives = 113/242 (46%), Gaps = 18/242 (7%)
Frame = +2
Query: 26 SRVLAAKTPFLGQGRAAANASPLRDVAAAASGRITMGNDLWYGPDRVKYLGPFSAQTPSY 205
S V K FLG R + A +A+ + + D PDR + + P +
Sbjct: 25 SIVGTTKASFLGGRRLRVSKYSTTPTARSAT-TVCVAAD----PDRPLWFP--GSTPPPW 77
Query: 206 LTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKE 385
L G PGD+G+D GL++DPE+ N+ E++H RWAMLGA G PE+L K + +
Sbjct: 78 LDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTK-IGI-LNT 135
Query: 386 PVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEG-------------- 523
P W+ AG Q +Y + + +++L+G EG
Sbjct: 136 PSWYTAGEQ-------EYFTDTTTLFI--------VELVLIGWAEGRRWADIIKPGCVNT 180
Query: 524 ---FRINGLDGVGEGNNLYPGGQYFDPLGL-ADDPVTFAELKVKEIKNGRLAMFSMFGFF 691
F N L G G YPGG +FDPLG + P EL+ KEIKNGRLAM ++ G +
Sbjct: 181 DPIFPNNKLTGTDVG---YPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAW 237
Query: 692 VQ 697
Q
Sbjct: 238 FQ 239
Score = 28.1 bits (61), Expect(2) = 8e-24
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 700 IVTGEGPLENLLDHLDDP 753
I TG GP++NL HL DP
Sbjct: 241 IYTGTGPIDNLFAHLADP 258
>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2,
chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1
SV=1
Length = 287
Score = 101 bits (251), Expect(2) = 5e-23
Identities = 76/220 (34%), Positives = 100/220 (45%), Gaps = 43/220 (19%)
Frame = +2
Query: 188 AQTPSYLTGEFPGDYGWDTAGL--------------------------------SADPEA 271
A++P YL G GDYG+D GL + DP++
Sbjct: 59 AKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKS 118
Query: 272 -----------FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIF 418
R R E+IHGRWAML LG IT E L W AG
Sbjct: 119 TPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTG--------VTWQDAGKVEL 170
Query: 419 SEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNNLYPGGQYFDPL 598
+G YLG P SI ++ +V+++G +E R LD LYPGG++FDPL
Sbjct: 171 VDGS-SYLGQPLPF---SISTLIWIEVLVIGYIEFQRNAELDSE---KRLYPGGKFFDPL 223
Query: 599 GLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQPSSPARG 718
GLA DPV A+L++ EIK+ RLAM GF VQ ++ +G
Sbjct: 224 GLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKG 263
Score = 27.7 bits (60), Expect(2) = 5e-23
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 697 AIVTGEGPLENLLDHLDDPV 756
A TG+GPL N HL DP+
Sbjct: 257 AAATGKGPLNNWATHLSDPL 276
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P58728|SF3BB_ARATH Uncharacterized protein At4g14342
OS=Arabidopsis thaliana GN=At4g14342 PE=3 SV=1
Length = 87
Score = 173 bits (438), Expect = 9e-43
Identities = 79/87 (90%), Positives = 87/87 (100%)
Frame = +3
Query: 96 MQASDRFNINSQLEHLQAKYVGTGHADMNRFEWAVNIQRDSYASYIGHYPLLAYFSIAEN 275
MQASDRFNINSQLEHLQAKYVGTGHAD++RFEWAVNIQRDSYASYIGHYP+L+YF+IAEN
Sbjct: 1 MQASDRFNINSQLEHLQAKYVGTGHADLSRFEWAVNIQRDSYASYIGHYPMLSYFAIAEN 60
Query: 276 ESIGRERYSFMQKMLLPCGLPPEREDD 356
ESIGRERY+FMQKMLLPCGLPPERE++
Sbjct: 61 ESIGRERYNFMQKMLLPCGLPPEREEE 87