miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|184047809|gb|FF905964.1|FF905964 ATTTGGGTTAAATTAGGTGAACAGTTTATAATGTTTGGTGAGAAAGCCTTGGATTTAATACGTGAAGTTCATCGAACCAG
AGAAGGCTCACTTAGTCCATACAATGAAGATGGTGTTCGACAAGTCTTGGAAGAAATGCAAGTTTTGTACGAAGCCAACC
AACAAGATGTCGCTCAACTTGTACAAAACGATTCCGACCAAACCTCTTTAACTGCTGTTCAAATACGACACGACAGTTTG
CAACGAAACAAAAGATGTTTGCTCGCTTATTTATACAACCGATTACAAAAGATCCGCGCTTTACGTTGGGAGTTTGGAAG
TGTGTTGCCTACTGATGTAAGAGGGAACATGTCTCCAAAAGAGATAGAATGGTTCACCAAATACAACCGTGCGCTCGCAA
ACTACATGAGATCACTTGGGAACGGAGGACTTGATCTTACTCAGGTTTTATATTTTCTATTAGCTTGCTAGCATGTATTG
TTGTGGCTCATGTAAGTGAAGCTGTCACATGGGCCTCAATTCTGTTACTTCTGCTACCAGGTGTGATGTAAATAATCTTT
AAGCAGCTCATCTGGTATAAAAACGTAGTGTATATGTGTCACATTTCTTTAAGTCTTGCCCGGTGACAGCTGAAACATCG
GAACAGAATCCTCACAGGGCCGGATAACGGAAACACACTACGTTTTATGCCGGATTAACTGCTAAAAGATTATTAATCTA
TGCTTT




Most similar to sp|Q14691|PSF1_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q14691|PSF1_HUMAN DNA replication complex GINS protein PSF1
           OS=Homo sapiens GN=GINS1 PE=1 SV=1
          Length = 196

 Score =  158 bits (399), Expect = 4e-38
 Identities = 79/139 (56%), Positives = 104/139 (74%), Gaps = 1/139 (0%)
 Frame = +1

Query: 31  MFGEKALDLIREVHRTREGSLSPYNEDGVRQVLEEMQVLYEANQQDVAQLVQNDSDQTSL 210
           MF EKA++LIRE+HR  EG L  +NEDG+RQVLEEM+ LYE NQ DV +  ++      +
Sbjct: 1   MFCEKAMELIRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNE-AKSGGRSDLI 59

Query: 211 TAVQIRHDSLQRNKRCLLAYLYNRLQKIRALRWEFGSVLPTDVRGNMSPKEIEWFTKYNR 390
             ++ RH SL RN+RC +AYLY+RL +IRALRWE+GSVLP  +R +M+ +E+EWF  Y R
Sbjct: 60  PTIKFRHCSLLRNRRCTVAYLYDRLLRIRALRWEYGSVLPNALRFHMAAEEMEWFNNYKR 119

Query: 391 ALANYMRSL-GNGGLDLTQ 444
           +LA YMRSL G+ GLD+TQ
Sbjct: 120 SLATYMRSLGGDEGLDITQ 138