miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|187444191|gb|DK069371.1|DK069371 CAAAAGGATTCAGCTGGAAGAAGTTATTGCTGCTTCTAAAGACTCCCAGTCAGCTCACAAACTTGAAAAATCAGAATTGC
TAACAAGTTGAAGGACAGAATATGTATGAAAATGATCCAAGCATTAACAATGTGTCATGTTTGCACAGTAACATCTACAA
TTGATAATAATGAACAATATCCATAAATGCAGCTGAATTCTTAAAAATATATACAAATTCCATTGAGTTAAATCTTTGGA
GAGAAAACAGACCCACCCACATCTCACATTGACTTATTGATAAACTGAAATATTCCTTCTCAGTCTTCAGCTGACACCAG
CGGCCGAGTCTTAGTAACTGAACCAAGCGGGTCTCTTCCTGGGTCTCTCCACTATCCTCTTGTCTTTATCCTGGTTGCTT
GGCGTTTCCCCCTCATACAGGACCACAGTCTCCACGGTTGGGGCCCTCAGCGGGCCGCCTTCCATCGCATTTATCTGTTG
ACGAATCAGAGCCGTCTCTCTGCTCACTTTAGCGTAGCAGAACCCACACAGGGTGTGCTTCTGCTTCAGGTGGCCGCACT
CCAGACACGGCTCGATGTTGTTCTTCACTTTAATAAGTTTGCTTTCAGATCTCCTCCTGGTGCGGTTGACCTCTATGGTG
CGCCTCTTCTTTGGTGCTGCCATCCAGAGGATGCTGTCCAGGAGGCCAGTGGGCTGCTCCTGGCTCTCCTGCTGCTCTT




Most similar to sp|Q9BYC8|RM32_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9BYC8|RM32_HUMAN 39S ribosomal protein L32, mitochondrial
           OS=Homo sapiens GN=MRPL32 PE=1 SV=1
          Length = 188

 Score =  158 bits (400), Expect = 3e-38
 Identities = 75/121 (61%), Positives = 89/121 (73%)
 Frame = -3

Query: 699 EQPTGLLDSILWMAAPKKXXXXXXXXXXXRSESKLIKVKNNIEPCLECGHLKQKHTLCGF 520
           ++ + LLDSI WMAAPK            R+  KLIKVKNNI+ C ECGHLKQKH LC +
Sbjct: 66  KENSSLLDSIFWMAAPKNRRTIEVNRCRRRNPQKLIKVKNNIDVCPECGHLKQKHVLCAY 125

Query: 519 CYAKVSRETALIRQQINAMEGGPLRAPTVETVVLYEGETPSNQDKDKRIVERPRKRPAWF 340
           CY KV +ETA IR+QI   EGGP +APT+ETVVLY GETPS QD+ KRI+ER RKRP+WF
Sbjct: 126 CYEKVCKETAEIRRQIGKQEGGPFKAPTIETVVLYTGETPSEQDQGKRIIERDRKRPSWF 185

Query: 339 S 337
           +
Sbjct: 186 T 186