miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|189271039|gb|FM029257.1|FM029257 GCAGGGACCCCGGAGCAGAAGAAGGAGCTGGCAGACATCGCTCACCGCATCGTGGCACCAGGCAAGGGCATCCAGGCTGC
AGAAGAGCCCACTGGGAGCGTTGCCAAGCGGCTGCAGTCCATTGGCACCGAGAACACCGAGGAGAACCGGCGCTTCTACC
GCCAGCTGCTGCTGACAGCTGACGACCGCGTGAACCCCTGCATTGGGGGTGTCATCCTCTTCCATGAGACACTCTACCAG
AAGGCGGATGATGGGCGTCCCTTCCCCCAAGTTATCAAATCCAAGGGCGGTGTTGTGGGCATCAAGGAAGACAAGGGCGT
GGTGGGGGGGGGAGGGACAAATGGCGAGACTACCACCCAAGGGTTGGATGGGCTGTCTGAGCGCTGTGCCCAGTACAAGA
AGGACGGAGCTGACTTCGCCAAGTGGCGTTGTGTGCTGAAGATTGGGGAACACACCCCCTCAGCCCTCGCCATCATGGAA
AATGCCAATGTTCTGGCCCGTTATGCCAGTATCTGCCAGCAGAATGGCATTGTGCCCATCGTGGAGCCTGAGATCCTCCC
TGATGGGGACCATGACTTGAAGCGCTGCCAGTATGTGACCGAGAAGGTGCTGGCTGCTGTCTACAAGGCTCTGAGTGA




Most similar to sp|P05065|ALDOA_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P05065|ALDOA_RAT Fructose-bisphosphate aldolase A OS=Rattus
          Length = 364

 Score =  352 bits (902), Expect = 1e-96
 Identities = 178/210 (84%), Positives = 181/210 (86%)
 Frame = +1

Query: 7   TPEQKKELADIAHRIVAPGKGIQAAEEPTGSVAKRLQSIGTENTEENRRFYRQLLLTADD 186
           TPEQKKELADIAHRIVAPGKGI AA+E TGS+AKRLQSIGTENTEENRRFYRQLLLTADD
Sbjct: 9   TPEQKKELADIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADD 68

Query: 187 RVNPCIGGVILFHETLYQKADDGRPFPQVIKSXXXXXXXXXXXXXXXXXXXXXXXXXXXL 366
           RVNPCIGGVILFHETLYQKADDGRPFPQVIKS                           L
Sbjct: 69  RVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGL 128

Query: 367 DGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVE 546
           DGLSERCAQYKKDGADFAKWRCVLKIGEHTPS+LAIMENANVLARYASICQQNGIVPIVE
Sbjct: 129 DGLSERCAQYKKDGADFAKWRCVLKIGEHTPSSLAIMENANVLARYASICQQNGIVPIVE 188

Query: 547 PEILPDGDHDLKRCQYVTEKVLAAVYKALS 636
           PEILPDGDHDLKRCQYVTEKVLAAVYKALS
Sbjct: 189 PEILPDGDHDLKRCQYVTEKVLAAVYKALS 218