miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|190476480|gb|FG867479.1|FG867479 GTGAGCAAACATTAAATCTTAAAGCTTGGAAAACCCTCTCTTCCCTGTCCCTAAGAATTGGGAGAGAGTAATTTGGTCTA
TAGCAACTCAATTCAACCCATCAATCCCACACCATGCAGGCCAGTGATAGGTTTAACATCAACTCTCAGCTCGAGCATCT
CCAAGCCAAATATGTTGGAACTGGTCATGCCGATATGAACAGATTTGAATGGGCAGTGAACATTCAGCGTGATAGCTATG
CATCATACATTGGCCACTACCCTTTACTGGCATACTTTTCTATTGCTGAAAATGAATCTATTGGAAGGGAACGCTATAGT
TTTATGCAGAAAATGCTCCTGCCTTGTGGATTACCTCCAGAAAGAGAAGATGATTAATCACAAGTACAGTTTATGTAGTA
TTTGACAATGTATTGTGTTGTGTTTGTTATCTGATAGAGTAAACAGTTGGTTGTCCTTGATTACGTATTGTAGTGATATT
TCTTTAGTTTGTGGATGCTTAAGTAGTTGTTATGGAGCTTGAAAATTTTTCAAAATATGTTTAGTTTATTGTTGAATCTT
AATTTTGTCTGTGTTTCTTAAATGGTGCCCTTTAGATTGAACGAACCTTGTATTCGCAACGGATTTTATGTAGTAATTAT
TTCCTTCGGAAATTTTAATAATGACTTCCTTTTTTGAAAAAAAAAAAAAAAAA




Most similar to sp|P58728|SF3BB_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P58728|SF3BB_ARATH Uncharacterized protein At4g14342
           OS=Arabidopsis thaliana GN=At4g14342 PE=3 SV=1
          Length = 87

 Score =  173 bits (438), Expect = 1e-42
 Identities = 79/87 (90%), Positives = 87/87 (100%)
 Frame = +3

Query: 114 MQASDRFNINSQLEHLQAKYVGTGHADMNRFEWAVNIQRDSYASYIGHYPLLAYFSIAEN 293
           MQASDRFNINSQLEHLQAKYVGTGHAD++RFEWAVNIQRDSYASYIGHYP+L+YF+IAEN
Sbjct: 1   MQASDRFNINSQLEHLQAKYVGTGHADLSRFEWAVNIQRDSYASYIGHYPMLSYFAIAEN 60

Query: 294 ESIGRERYSFMQKMLLPCGLPPEREDD 374
           ESIGRERY+FMQKMLLPCGLPPERE++
Sbjct: 61  ESIGRERYNFMQKMLLPCGLPPEREEE 87