miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|19126097|gb|BM809274.1|BM809274 GGCCGCAGGCACCTCCTCGCCAGCTCTTCCGCTCCTCTCACAGCCGCCAGACCCGCCTGCTGAGCCCCATGGCCCGCGCT
GCTCTCTCCGCCGCCCCCAGCAATCCCCGGCTCCTGCGAGTGGCACTGCTGCTCCTGCTCCTGGTAGCCGCTGGCCGGCG
CGCAGCAGGAGCGTCCGTGGCCACTGAACTGCGCTGCCAGTGCTTGCAGACCCTGCAGGGAATTCACCCCAAGAACATCC
AAAGTGTGAACGTGAAGTCCCCCGGACCCCACTGCGCCCAAACCGAAGTCATAGCCACACTCAAGAATGGGCGGAAAGCT
TGCCTCAATCCTGCATCCCCCATAGTTAAGAAAATCATCGAAAAGATGCTGAACAGTGACAAATCCAACTGACCAGAAGG
GAGGAGGAAGCTCACTGGTGGCTGTTCCTGAAGGAGGCCCTGCCCTTATAGGAACAGAAGAGGAAAGAGAGACACAGCTG
CAGAGGCCACCTGGATTGTGCCTAATGTGTTTGAGCATCGCTTAGGAGAAGTCTTCTATTTATTTATTTATTCATTAGTT
TTGAAGATTCTATGTTAATATTTTAGGTGTAAAATAATTAAGGGTATGATTAACTCTACCTGCACACTGTCCTATTATAT
TCATTCTTTTTGAGATGTCAACCCCAAGTTAGTTCAATCTGGATTCATATTTAATTTGAAGGTAGAATGTTTTCAAATGT
TCTCCAGTCATTATGTTAATATTTCTGAGGAGCCTGCAACATGCCAGCCACTGTGATAGAGGCTGGCGGATCCAAGCAAA
TGGCCAATGAGATCATTGTGAAGGCAGGGGCATGTATGTGCACATCTGTTTTTGTACTGGTTAGATGAATGGCAGTTGTT
ATTTTATGAAATGATTTCCCGGTGGGTGGGCCAACTTTTCTCATGGTGAAACTTTAAGAACTAAAATGTTCTAAATATCC
CTTGGACATTTAAAGCCCTTTCTGGAAAGGCATACTGGCCTTTGTTTAAGGGGAAGGTTTTACCGTGGTTTCTGGCTAAA
AACAAGGGGCCTTTAATAATGGAGGGGTTTTCCCTGGGAATTTTTACATTTAG




Most similar to sp|P09341|GROA_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P09341|GROA_HUMAN Growth-regulated alpha protein OS=Homo sapiens
           GN=CXCL1 PE=1 SV=1
          Length = 107

 Score =  164 bits (414), Expect = 1e-39
 Identities = 85/107 (79%), Positives = 85/107 (79%)
 Frame = +3

Query: 69  MARAALSAAPSNPXXXXXXXXXXXXXXXXXXXXXXSVATELRCQCLQTLQGIHPKNIQSV 248
           MARAALSAAPSNP                      SVATELRCQCLQTLQGIHPKNIQSV
Sbjct: 1   MARAALSAAPSNPRLLRVALLLLLLVAAGRRAAGASVATELRCQCLQTLQGIHPKNIQSV 60

Query: 249 NVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSDKSN 389
           NVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSDKSN
Sbjct: 61  NVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSDKSN 107