miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|198083139|gb|FL810069.1|FL810069 CCCTCGCCGGTCTACTCCACCGCGCGGGTCTTCAAGGAGGAGGCCGTCTACAGCTTCCCGCTCGCCGTCCCCGGCTGGCA
CTTCATCCGCATCTACCTCTTCCCGCTCAAGGGCGGCGACGTCGACCTCGCCTCCGCCACCTTCAGCGTCGTCACCGACG
ACTACGTCCTGCTCCACAGCTTCACCCCGGAGAACAAGCCCGTGCTCAAGGAGTACCTCATCAACGCCACCGAGAACCGC
CTCGCCCTCAAGTTCCAGCCGCTCTCGGGCTCCGCCGCCTTCGTCAACGCCCTCGAGGTCGTCAACGCCCCCGACGAGCT
CATCACCGACTCGGCGCTCGCCATCGCGCCGCTCGGCGAGACCACCGGCCTCGCGCACGAGGCGTACCAGGTGCTCTACC
GGCTCAACGTCGGCGGCCCGGCCATCGGCCCCGCCAACGACACGCTCGGCCGGCGGTGGGACCCCGACACGCCGTACGTG
CAGTCCAAGGAGGCGGTCAAGGACGTGTCCGTGCCCGCCAGCACCATCAAGTTCCCCGACGGGACGTCCAGGCTCGTCGC
GCCCACGGCGGTGTACGCGAGCGCCGCCAGATGGCGGATGCCGACGTCGGGAACGCCAACTTCAACCTGACGTGGAAGGT
GGACGTGGACGCGTCCTTCGGCTACCTGGTCCGGCTCTTCTTCGCCGACATCGTGAGCAAGCCGCCCACGACCTCTACTT
CGACGTGTACATCAACGGGCGCAAGCC




Most similar to sp|Q9SJT0|Y2214_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9SJT0|Y2214_ARATH Probable receptor-like protein kinase
           At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1
          Length = 871

 Score =  207 bits (528), Expect(3) = 9e-61
 Identities = 98/202 (48%), Positives = 137/202 (67%), Gaps = 6/202 (2%)
 Frame = +1

Query: 1   PSPVYSTARVFKEEAVYSFPLAVPGWHFIRIYLFPLKGGDVDLASATFSVVTDDYVLLHS 180
           PSP+Y TA++F+EEA+Y F L  PGWH++R++ F       DL  ATFSV+T+ YVLLH+
Sbjct: 102 PSPIYLTAKIFREEAIYKFHLTRPGWHWVRLHFFAFPNDKFDLQQATFSVLTEKYVLLHN 161

Query: 181 FTPENK------PVLKEYLINATENRLALKFQPLSGSAAFVNALEVVNAPDELITDSALA 342
           F   N        V KEYL+N T+ + AL+F+P+ GSAAF+N +E+V+APDELI+D+  +
Sbjct: 162 FKLSNDNNDSQATVQKEYLLNMTDAQFALRFKPMKGSAAFINGIELVSAPDELISDAGTS 221

Query: 343 IAPLGETTGLAHEAYQVLYRLNVGGPAIGPANDTLGRRWDPDTPYVQSKEAVKDVSVPAS 522
           + P+   +GL+  AYQ +YR+NVGGP I P NDTLGR W PD  Y++ +   KDV    +
Sbjct: 222 LFPVNGFSGLSDYAYQSVYRVNVGGPLITPQNDTLGRTWTPDKEYLKDENLAKDVKTNPT 281

Query: 523 TIKFPDGTSRLVAPTAVYASAA 588
            I +P G + L+AP  VYA+ A
Sbjct: 282 AIIYPPGVTPLIAPQTVYATGA 303



 Score = 42.7 bits (99), Expect(3) = 9e-61
 Identities = 18/38 (47%), Positives = 25/38 (65%)
 Frame = +3

Query: 588 QMADADVGNANFNLTWKVDVDASFGYLVRLFFADIVSK 701
           +MAD+   + NFN+TW    + SF Y +RL F DI+SK
Sbjct: 304 EMADSQTIDPNFNVTWNFPSNPSFHYFIRLHFCDIISK 341



 Score = 25.8 bits (55), Expect(3) = 9e-61
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = +2

Query: 698 QAAHDLYFDVYINGR 742
           ++ +DLYF+VYING+
Sbjct: 341 KSLNDLYFNVYINGK 355


>sp|Q9T020|Y4391_ARATH Probable receptor-like protein kinase
           At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1
          Length = 878

 Score =  203 bits (517), Expect(3) = 8e-59
 Identities = 100/200 (50%), Positives = 134/200 (67%), Gaps = 6/200 (3%)
 Frame = +1

Query: 4   SPVYSTARVFKEEAVYSFPLAVPGWHFIRIYLFPLKGGDVDLASATFSVVTDDYVLLHSF 183
           SP+Y TAR+F+EEA Y F L  PGWH++R++         DL  ATFSV+T+ YVLLH+F
Sbjct: 104 SPIYLTARIFREEATYKFHLTRPGWHWVRLHFLAFPNDKFDLQQATFSVLTEKYVLLHNF 163

Query: 184 TPENK------PVLKEYLINATENRLALKFQPLSGSAAFVNALEVVNAPDELITDSALAI 345
              N        V KEYL+N T+ + AL+F+P+  SAAF+NA+EVV+APDELI+DS  A+
Sbjct: 164 KISNNNNDSQAAVQKEYLVNMTDAQFALRFRPMKSSAAFINAIEVVSAPDELISDSGTAL 223

Query: 346 APLGETTGLAHEAYQVLYRLNVGGPAIGPANDTLGRRWDPDTPYVQSKEAVKDVSVPAST 525
            P+   +GL+  AYQ +YR+NVGGP I P NDTLGR W PD  +++ +   KDV    S 
Sbjct: 224 FPVIGFSGLSDYAYQSVYRVNVGGPLIMPQNDTLGRTWIPDKEFLKDENLAKDVKTTPSA 283

Query: 526 IKFPDGTSRLVAPTAVYASA 585
           IK+P   + L+AP  VYA+A
Sbjct: 284 IKYPPEVTPLIAPQTVYATA 303



 Score = 40.4 bits (93), Expect(3) = 8e-59
 Identities = 18/38 (47%), Positives = 26/38 (68%)
 Frame = +3

Query: 588 QMADADVGNANFNLTWKVDVDASFGYLVRLFFADIVSK 701
           +MA++   + NFN++W    + SF YL+RL F DIVSK
Sbjct: 305 EMANSLTIDPNFNVSWNFPSNPSFNYLIRLHFCDIVSK 342



 Score = 25.8 bits (55), Expect(3) = 8e-59
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = +2

Query: 698 QAAHDLYFDVYINGR 742
           ++ +DLYF+VYING+
Sbjct: 342 KSLNDLYFNVYINGK 356


>sp|Q9FLJ8|Y5613_ARATH Probable receptor-like protein kinase
           At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1
          Length = 842

 Score =  160 bits (404), Expect(2) = 2e-46
 Identities = 86/196 (43%), Positives = 126/196 (64%), Gaps = 3/196 (1%)
 Frame = +1

Query: 7   PVYSTARVFKEEAVYSFPLAVPGWHFIRIYLFPLKGGDVDLASATFSVVTDDYVLLHSFT 186
           P+Y TAR+F  ++ YSF ++ PG H+IR++ +PL     +L ++ FSV TD  VLLH F+
Sbjct: 86  PLYLTARIFAGKSTYSFYISRPGRHWIRLHFYPLNHPLYNLTNSVFSVTTDTTVLLHDFS 145

Query: 187 PENKP--VLKEYLINATENRLALKFQPLSGSAAFVNALEVVNAPDELITDSALAIAPLGE 360
             +    V KEYLI A E +L+L F+P  GS AF+NA+E+V+ PDEL+ DSA ++    +
Sbjct: 146 AGDTSSIVFKEYLIYAAE-KLSLYFKPHKGSTAFINAVEIVSVPDELVPDSASSVPQAPD 204

Query: 361 TTGLAHEAYQVLYRLNVGGPAIGPANDTLGRRWDPDTPYVQSKEAVKDVSVPASTIKFPD 540
             GL+  + ++L+R+N+GG  I P  D L R W  D PY    E  ++V+V  STI +PD
Sbjct: 205 FKGLSSFSLEILHRINIGGDLISPKIDPLSRTWLSDKPYNTFPEGSRNVTVDPSTITYPD 264

Query: 541 -GTSRLVAPTAVYASA 585
            G + L+AP  VYA+A
Sbjct: 265 GGATALIAPNPVYATA 280



 Score = 47.0 bits (110), Expect(2) = 2e-46
 Identities = 20/38 (52%), Positives = 25/38 (65%)
 Frame = +3

Query: 588 QMADADVGNANFNLTWKVDVDASFGYLVRLFFADIVSK 701
           +MADA     NFNL+W++ VD    Y +RL F DIVSK
Sbjct: 282 EMADAQTSQPNFNLSWRMSVDFGHDYFIRLHFCDIVSK 319


>sp|Q9LK35|THE1_ARATH Receptor-like protein kinase THESEUS 1
           OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1
          Length = 855

 Score =  158 bits (399), Expect(2) = 8e-45
 Identities = 83/195 (42%), Positives = 119/195 (61%), Gaps = 3/195 (1%)
 Frame = +1

Query: 10  VYSTARVFKEEAVYSFPLAVPGWHFIRIYLFPLKGGDVDLASATFSVVTDDYVLLHSFTP 189
           +Y TARVF   A Y F +   G H+IR++  P+     +L SA+ +VVT+D+VLL++F+ 
Sbjct: 80  IYQTARVFSSLASYRFKITSLGRHWIRLHFSPINNSTWNLTSASITVVTEDFVLLNNFSF 139

Query: 190 EN---KPVLKEYLINATENRLALKFQPLSGSAAFVNALEVVNAPDELITDSALAIAPLGE 360
            N     + KEY +N T   L L F P + S  FVNA+EVV+ PD LI D ALA+ P   
Sbjct: 140 NNFNGSYIFKEYTVNVTSEFLTLSFIPSNNSVVFVNAIEVVSVPDNLIPDQALALNPSTP 199

Query: 361 TTGLAHEAYQVLYRLNVGGPAIGPANDTLGRRWDPDTPYVQSKEAVKDVSVPASTIKFPD 540
            +GL+  A++ +YRLN+GGP +   NDTLGR+WD D  Y+    +V  V+   S+IK+  
Sbjct: 200 FSGLSLLAFETVYRLNMGGPLLTSQNDTLGRQWDNDAEYLHVNSSVLVVTANPSSIKYSP 259

Query: 541 GTSRLVAPTAVYASA 585
             ++  AP  VYA+A
Sbjct: 260 SVTQETAPNMVYATA 274



 Score = 43.9 bits (102), Expect(2) = 8e-45
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = +3

Query: 591 MADADVGNANFNLTWKVDVDASFGYLVRLFFADIVSK 701
           M DA+V + +FN+TW + VD  F Y VR+ F DIVS+
Sbjct: 277 MGDANVASPSFNVTWVLPVDPDFRYFVRVHFCDIVSQ 313


>sp|Q9FN92|Y5597_ARATH Probable receptor-like protein kinase
           At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=1 SV=1
          Length = 829

 Score =  137 bits (344), Expect(2) = 7e-39
 Identities = 79/194 (40%), Positives = 117/194 (60%), Gaps = 1/194 (0%)
 Frame = +1

Query: 4   SPVYSTARVFKEEAVYSFPLAVPGWHFIRIYLFPLKGGDVDLASATFSVVTDDYVLLHSF 183
           S +Y TAR+F   + Y F +A  G H+IR++  P +  +  + SA FSV ++ +VLL  F
Sbjct: 74  SDIYQTARIFTGISKYRFSVA-RGRHWIRLHFNPFQYQNFQMVSAKFSVSSETHVLLSDF 132

Query: 184 TPENKPVLKEYLINATENRLALKFQPLSGSAAFVNALEVVNAPDELIT-DSALAIAPLGE 360
           T  ++ V+KEY +N   + L L F P   S AF+NALEVV+ PD L + D + A +P G+
Sbjct: 133 TVSSR-VMKEYSLNVATDHLELTFTPSGDSFAFLNALEVVSVPDTLFSGDPSFAGSP-GK 190

Query: 361 TTGLAHEAYQVLYRLNVGGPAIGPANDTLGRRWDPDTPYVQSKEAVKDVSVPASTIKFPD 540
             GL+ +A + +YR+N+GGP + P+NDTL R W+PD+ ++  K  VK VS  AS    P 
Sbjct: 191 FQGLSWQALETVYRVNMGGPRVTPSNDTLSRIWEPDSEFLVEKNLVKSVSKIASVDYVPG 250

Query: 541 GTSRLVAPTAVYAS 582
             +   AP  VY +
Sbjct: 251 FATEETAPRTVYGT 264



 Score = 45.1 bits (105), Expect(2) = 7e-39
 Identities = 20/38 (52%), Positives = 25/38 (65%)
 Frame = +3

Query: 588 QMADADVGNANFNLTWKVDVDASFGYLVRLFFADIVSK 701
           +M  AD  ++NFN+TW  DVD  F Y +R  F DIVSK
Sbjct: 267 EMNSADNPSSNFNVTWDFDVDPGFQYFLRFHFCDIVSK 304


>sp|Q9LX66|HERK_ARATH Receptor-like protein kinase HERK 1
           OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1
          Length = 830

 Score =  134 bits (337), Expect = 7e-31
 Identities = 76/194 (39%), Positives = 110/194 (56%), Gaps = 1/194 (0%)
 Frame = +1

Query: 4   SPVYSTARVFKEEAVYSFPLAVPGWHFIRIYLFPLKGGDVDLASATFSVVTDDYVLLHSF 183
           S +Y TARVF E + Y F +   G H++R+Y  P    +  + SA F+V +  +VLL  F
Sbjct: 74  SDIYHTARVFTEVSSYKFSVT-RGRHWVRLYFNPFDYQNFKMGSAKFAVSSQSHVLLSDF 132

Query: 184 TPENKPVLKEYLINATENRLALKFQPLSGSAAFVNALEVVNAPDELITDSALAIAPLGET 363
           T  +  V+KEY +N T N L L F P SGS AFVNA+EV++ PD LIT S   +    + 
Sbjct: 133 TVTSSKVVKEYSLNVTTNDLVLTFTPSSGSFAFVNAIEVISIPDTLITGSPRFVGNPAQF 192

Query: 364 TGLAHEAYQVLYRLNVGGPAIGPANDTLGRRWDPDTPYVQSKEAVKDVSVPASTIKF-PD 540
             ++ +  + ++R+N+GGP +   NDTL R W PD+ ++  K   K +S   ST+ F P 
Sbjct: 193 PDMSMQGLETIHRVNMGGPLVASNNDTLTRTWVPDSEFLLEKNLAKSMS-KFSTVNFVPG 251

Query: 541 GTSRLVAPTAVYAS 582
             +   AP  VY S
Sbjct: 252 YATEDSAPRTVYGS 265