| EST name | EST sequence |
| gi|207970879|gb|FM081849.1|FM081849 | CTTTTTATTTTTGGTCTGGCTGTTGTGGTGTGCAAAACTCCGTACATTGCTATTTTGCCACACTGCAACACCTTACAGAT GTGGAAGATGTGAAATTTGTCATCAATTATGACTACCCTAACTCCTCAGAGGATTATATTCATCGAATTGGAAGAACTGC TCGCAGTACCAAAACAGGCACAGCATACACTTTCTTTACTCCCAATAACATAAAGCAAGTGAGCGACCTCATCTCTGTGC TTCGGGAAGCCAATCAAGCAATTAATCCCAAGTTGCTTCAGTTGGTCGAAGACAGAGGTTCAGGTCGTTCCAGGGGTAGA GGAGGCATGAAGGATGATCGTCGTGACAGATACTCTGCAGGGAAAAGGGGTGGATTTAATACCTTTAGAGACAGGGAAAA CTATGACAGAGGCTACTCTAGTCTGCT |
Most similar to sp|Q5R4I9|DDX5_PONAB
>BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P41095|RLA0_ORYSJ 60S acidic ribosomal protein P0 OS=Oryza
sativa subsp. japonica GN=Os08g0130500 PE=1 SV=3
Length = 319
Score = 192 bits (488), Expect(2) = 3e-52
Identities = 97/107 (90%), Positives = 103/107 (96%)
Frame = +3
Query: 111 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 290
MAIKRTKAEKK+AYD+KLCQLL+EYTKVLIAVADNVGS QLQEIRKGLRGDSIVLMGKNT
Sbjct: 1 MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60
Query: 291 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAK 431
LIRRCIKVH++ TGNK+FLEL LLVGNVGLIFTKGDLKEVREEVAK
Sbjct: 61 LIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAK 107
Score = 33.1 bits (74), Expect(2) = 3e-52
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 434 KVGAPARVGLVAPVD 478
KVGAPARVGLVAPVD
Sbjct: 109 KVGAPARVGLVAPVD 123
>sp|O24573|RLA0_MAIZE 60S acidic ribosomal protein P0 OS=Zea mays
GN=RP-P0 PE=1 SV=3
Length = 319
Score = 182 bits (461), Expect(2) = 4e-49
Identities = 92/107 (85%), Positives = 101/107 (94%)
Frame = +3
Query: 111 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 290
MAIKRTKAEKKIAYD+KLC LL+EYTKVLIA+ADNVGSKQLQ+IR+GLRGDS+VLMGKNT
Sbjct: 1 MAIKRTKAEKKIAYDKKLCSLLDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNT 60
Query: 291 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAK 431
LIRRCIKV++EKTGN F L +LLVGNVGLIFTKGDLKEVREEVAK
Sbjct: 61 LIRRCIKVYAEKTGNHTFDPLMDLLVGNVGLIFTKGDLKEVREEVAK 107
Score = 33.1 bits (74), Expect(2) = 4e-49
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 434 KVGAPARVGLVAPVD 478
KVGAPARVGLVAPVD
Sbjct: 109 KVGAPARVGLVAPVD 123
>sp|O04204|RLA01_ARATH 60S acidic ribosomal protein P0-1
OS=Arabidopsis thaliana GN=RPP0A PE=2 SV=1
Length = 317
Score = 160 bits (406), Expect(2) = 1e-42
Identities = 77/107 (71%), Positives = 92/107 (85%)
Frame = +3
Query: 111 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 290
MA+K TKAEKKI YD KLCQLL EY+++L+ ADNVGS QLQ IRKGLRGDS+VLMGKNT
Sbjct: 1 MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60
Query: 291 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAK 431
+++R +++H++KTGN+ FL L LL GNVGLIFTKGDLKEV EEVAK
Sbjct: 61 MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAK 107
Score = 32.7 bits (73), Expect(2) = 1e-42
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 434 KVGAPARVGLVAPVD 478
KVGAPARVGLVAP+D
Sbjct: 109 KVGAPARVGLVAPID 123
>sp|P50346|RLA0_SOYBN 60S acidic ribosomal protein P0 OS=Glycine max
PE=2 SV=1
Length = 320
Score = 157 bits (398), Expect(2) = 8e-42
Identities = 77/107 (71%), Positives = 92/107 (85%)
Frame = +3
Query: 111 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 290
MA K+TKAEKKIAYD KLC L+EEY ++L+ +DNVGS QLQ IRKGLRGDS+VLMGKNT
Sbjct: 1 MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60
Query: 291 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAK 431
+++R +++H+EKTGN +L L LLVGNVGLIFTKGDLKEV EEVAK
Sbjct: 61 MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAK 107
Score = 32.7 bits (73), Expect(2) = 8e-42
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 434 KVGAPARVGLVAPVD 478
KVGAPARVGLVAP+D
Sbjct: 109 KVGAPARVGLVAPID 123
>sp|Q42112|RLA02_ARATH 60S acidic ribosomal protein P0-2
OS=Arabidopsis thaliana GN=RPP0B PE=1 SV=2
Length = 320
Score = 157 bits (397), Expect(2) = 1e-41
Identities = 76/105 (72%), Positives = 89/105 (84%)
Frame = +3
Query: 117 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 296
+K TKAEKKIAYD KLCQL++EYT++L+ ADNVGS QLQ IRKGLRGDS+VLMGKNT++
Sbjct: 2 VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61
Query: 297 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAK 431
+R +++HSE TGN L L LL GNVGLIFTKGDLKEV EEVAK
Sbjct: 62 KRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAK 106
Score = 32.7 bits (73), Expect(2) = 1e-41
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 434 KVGAPARVGLVAPVD 478
KVGAPARVGLVAP+D
Sbjct: 108 KVGAPARVGLVAPID 122
>sp|P50345|RLA0_LUPLU 60S acidic ribosomal protein P0 OS=Lupinus
luteus PE=2 SV=1
Length = 322
Score = 159 bits (402), Expect(2) = 2e-41
Identities = 78/107 (72%), Positives = 93/107 (86%)
Frame = +3
Query: 111 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 290
MA K TKAEKKI YD KLCQLL+EYT++L+ ADNVGSKQLQ IR+GLRGDS+VLMGKNT
Sbjct: 1 MAPKATKAEKKIVYDGKLCQLLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNT 60
Query: 291 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAK 431
+++R +++H+EKTGN+ FL L LL+GNVGLIFTKG LKEV EEVAK
Sbjct: 61 MMKRSVRIHAEKTGNQAFLNLIPLLIGNVGLIFTKGYLKEVSEEVAK 107
Score = 29.6 bits (65), Expect(2) = 2e-41
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 434 KVGAPARVGLVAPVD 478
KVGAPA VGLVAP+D
Sbjct: 109 KVGAPACVGLVAPID 123
>sp|P57691|RLA03_ARATH 60S acidic ribosomal protein P0-3
OS=Arabidopsis thaliana GN=RPP0C PE=1 SV=1
Length = 323
Score = 155 bits (393), Expect(2) = 3e-41
Identities = 75/105 (71%), Positives = 89/105 (84%)
Frame = +3
Query: 117 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 296
+K TKAEKKIAYD KLCQL++EYT++L+ ADNVGS QLQ IRKGLRGDS+VLMGKNT++
Sbjct: 2 VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61
Query: 297 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAK 431
+R +++HSE +GN L L LL GNVGLIFTKGDLKEV EEVAK
Sbjct: 62 KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAK 106
Score = 32.7 bits (73), Expect(2) = 3e-41
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 434 KVGAPARVGLVAPVD 478
KVGAPARVGLVAP+D
Sbjct: 108 KVGAPARVGLVAPID 122
>sp|P29764|RLA0_CHERU 60S acidic ribosomal protein P0 OS=Chenopodium
rubrum PE=2 SV=1
Length = 321
Score = 153 bits (387), Expect(2) = 6e-40
Identities = 75/107 (70%), Positives = 92/107 (85%)
Frame = +3
Query: 111 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 290
MA+K TKAEKKIAYDQKLCQLL+EY++VLIA ADNVGS QLQ IR GLRGDSIVLMGKNT
Sbjct: 1 MAVKPTKAEKKIAYDQKLCQLLDEYSQVLIASADNVGSNQLQAIRIGLRGDSIVLMGKNT 60
Query: 291 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAK 431
+++R I++H+E TGN++ + L + NVGLIFTKGDL +VREE++K
Sbjct: 61 MMKRSIRLHAENTGNENLRNVEQLFLPNVGLIFTKGDLNQVREEISK 107
Score = 30.8 bits (68), Expect(2) = 6e-40
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 434 KVGAPARVGLVAPVD 478
KVGAPAR GLVAP+D
Sbjct: 109 KVGAPARFGLVAPID 123
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5
OS=Pongo abelii GN=DDX5 PE=2 SV=1
Length = 614
Score = 188 bits (478), Expect = 8e-48
Identities = 96/116 (82%), Positives = 96/116 (82%)
Frame = +3
Query: 78 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 257
DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 465
Query: 258 AINPKLLQLVEXXXXXXXXXXXXXXXXXXXXYSAGKRGGFNTFRDRENYDRGYSSL 425
AINPKLLQLVE YSAGKRGGFNTFRDRENYDRGYSSL
Sbjct: 466 AINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSL 521