miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|207990807|gb|FM065232.1|FM065232 TGCTATTTTGCCACACTGCAACACCTTACAGATGTGGAAGATGTGAAATTTGTCATCAATTATGACTACCCTAACTCCTC
AGAGGATTATATTCATCGAATTGGAAGAACTGCTCGCAGTACCAAAACAGGCACAGCATACACTTTCTTTACTCCCAATA
ACATAAAGCAAGTGAGCGACCTCATCTCTGTGCTTCGGGAAGCCAATCAAGCAATTAATCCCAAGTTGCTTCAGTTGGTC
GAAGACAGAGGTTCAGGTCGTTCCAGGGGTAGAGGAGGCATGAAGGATGATCGTCGTGACAGATACTCTGCAGGGAAAAG
GGGTGGATTTAATACCTTTAGAGACAGGGAAAACTATGACAGAGGCTACTCTAGTCTGCTTAAGAGAGATTTTGGGGCTA
AAACTCAGAATGGTGTTTACAGTGCTGCAAATTACACCAATGGGAGCTTTGGAAGTAATTTTGTATCTGCTGGCATACAG
ACCAGTTTTAGGACTGGTAACCCAACAGGGACTTACCAGAACGGTTATGATAGCACTCAGCAATATGGAAGTAATGTTGC
AAATATGCACAATGGGATGAACCAACAGGCATATGC




Most similar to sp|Q61656|DDX5_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q61656|DDX5_MOUSE Probable ATP-dependent RNA helicase DDX5
           OS=Mus musculus GN=Ddx5 PE=1 SV=1
          Length = 614

 Score =  335 bits (860), Expect = 1e-91
 Identities = 167/188 (88%), Positives = 168/188 (89%)
 Frame = +1

Query: 31  DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 210
           DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 465

Query: 211 AINPKLLQLVEXXXXXXXXXXXXXXXXXXXXYSAGKRGGFNTFRDRENYDRGYSSLLKRD 390
           AINPKLLQLVE                    YSAGKRGGFNTFRDRENYDRGYS+LLKRD
Sbjct: 466 AINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSNLLKRD 525

Query: 391 FGAKTQNGVYSAANYTNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVANMH 570
           FGAKTQNGVYSAANYTNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVANMH
Sbjct: 526 FGAKTQNGVYSAANYTNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVANMH 585

Query: 571 NGMNQQAY 594
           NGMNQQAY
Sbjct: 586 NGMNQQAY 593