miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|211467270|gb|FL207513.1|FL207513 TTGTGGCTGCTCACGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTC
TTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGGTTTCAA
TTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTA
TGGAGGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTCTTGAAGTTCCTTACCTTAATGGATAA
GGTTTTTCTCCTAAACATATAGGAATTTTTGAAGGAAGGAAAGCCGGAAATACCCAATATCTTGTTCCAACAGGATATTG
GGTATTTCTTAACAAGCCTTCTATTATCTATTTTCTTTCTAGTTAATACGTGTGCTTGGGAGTCCTTGCAATTTGAATAA
ACCAAGATCTTACCATGACTGCAATTTTAGAGAGACGCGAAAGTACAAGCCCTGTGGGGTCGCTTCTGCAACTGGATAAC
TATCACCGAAAACCGTCTTTACATTGGATGGTTCGGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCCGTATTT
ATTATCGCCTTCATCGCTGCTCCTCAGTAGAATATGATGGTATTCGTGAGCCCTGTTCTGGNTCTTTACTTTATGGAAAA
CATATATCTCTGGTGCTAT




Most similar to sp|P48183|PSBA_MAIZE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P48183|PSBA_MAIZE Photosystem Q(B) protein OS=Zea mays GN=psbA
           PE=3 SV=1
          Length = 353

 Score =  219 bits (558), Expect = 2e-56
 Identities = 105/105 (100%), Positives = 105/105 (100%)
 Frame = +3

Query: 3   VAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVD 182
           VAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVD
Sbjct: 249 VAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVD 308

Query: 183 SQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAALEVPYLNG 317
           SQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAALEVPYLNG
Sbjct: 309 SQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAALEVPYLNG 353