miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|217055390|gb|GH221861.1|GH221861 TTTTTTTTTTTTTTTTTATGAGAAGTTCTTATTTTATACTTCAAGTTTGACAATTTACATATCAAAAATGTCAAAATGGT
GAAAAGGGGGAAAGCAAATGATGTACTCCCTTCATTCCAAATTAAGTGACCCAAATTTAGAACTAAGTTAGTACAAATAT
AGTACTAAAGCAACGGCGCTTATTTTGGGACGGAGGGAATATAAACCGAACCAATGTGTTGCCTGTAGCTGATATACATA
CTAGAGCTAGGTAGCTCAACATAAGGTGTACTCGCAATCAAGCAAACGAGTGAGGATCTCCTGGCAGCTTGGGCGCTTCT
CCGGTTCTGTCCAGCAATCTGCTATCAAGCTACCCAGAGGTCCATCTGGTATTTCCAATCTTGCCCCTTCGTTCGCAACA
GAGTAAACAACCTGAACTGGCGGCTTTCCTGCCCAGGGCCTACTCAGAGTGCAAAGCTCCCACATGATAACTCCTAGGCT
GAAGATATCACACTTTTCTGTAAATGGTTCGTTACGAATAAGCTCAGGAGCCATCCACTCTGGAGTGCCTGCAGATGAGT
TGTCACTCATTGCAGAATTCGACAATAACCGAGAGAGCCCAAAATCAC




Most similar to sp|Q05609|CTR1_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q05609|CTR1_ARATH Serine/threonine-protein kinase CTR1
            OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1
          Length = 821

 Score =  114 bits (286), Expect = 4e-25
 Identities = 58/112 (51%), Positives = 77/112 (68%), Gaps = 4/112 (3%)
 Frame = -3

Query: 606  DFGLSRLLSNSAMSDNSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWAG 427
            DFGLSRL +++ +S  S+AGTPEWMAPE++R+EP  EK D++S GVI+WEL TL +PW  
Sbjct: 694  DFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 753

Query: 426  KPPVQVVYSVANEGARLEIP---DGPLGSLIADCWT-EPEKRPSCQEILTRL 283
              P QVV +V  +  RLEIP   +  + ++I  CWT EP KRPS   I+  L
Sbjct: 754  LNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 805