miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|217056514|gb|GH222431.1|GH222431 TTTTTTTTTACTTCAAGTTTGACAATTTACATATCAAAAATGTCAAAATGGTGAAAAGGGGGAAAGCAAATGATGTACTC
CCTTCATTCCAAATTAAGTGACCCAAATTTAGAACTAAGTTAGTACAAATATAGTACTAAAGCAACGGCACTTATTTTGG
GACGGAGGGAATATAAACCGAACCAATGTGTTGCCTGTAGCTGATATACATACTAGAGCTAGGTAGCTCAACATAAGGTG
TACTCGCAATCAAGCAAACGAGTGAGGATCTCCTGGCAGCTTGGGCGCTTCTCCGGTTCTGTCCAGCAATCTGCTATCAA
GCTACCCAGAGGTCCATCTGGTATTTCCAATCTTGCCCCTTCGTTCGCAACAGAGTAAACAACCTGAACTGGCGGCTTTC
CTGCCCAGGGCCTACTCAGAGTGCAAAGCTCCCACATGATAACTCCTAGGCTGAAGATATCACACTTTTCTGTAAATGGT
TCGTTACGAATAAGCTCAGGAGCCATCCACTCTGGAGTGCCTGCAGATGAGTTGTCACTCATTGCA




Most similar to sp|Q05609|CTR1_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q05609|CTR1_ARATH Serine/threonine-protein kinase CTR1
            OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1
          Length = 821

 Score =  101 bits (252), Expect = 3e-21
 Identities = 51/100 (51%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
 Frame = -2

Query: 542  MSDNSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWAGKPPVQVVYSVAN 363
            +S  S+AGTPEWMAPE++R+EP  EK D++S GVI+WEL TL +PW    P QVV +V  
Sbjct: 706  LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF 765

Query: 362  EGARLEIP---DGPLGSLIADCWT-EPEKRPSCQEILTRL 255
            +  RLEIP   +  + ++I  CWT EP KRPS   I+  L
Sbjct: 766  KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 805