miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|222359810|gb|GH720623.1|GH720623 GCAGGTACGCTACAGCCGTTGACCCAAAGAAGGGTAATATTGGAATTATCGCACCTATTGCTATTGGTTTCATCGTTGGT
GCTAACATTTTGGTTGGTGGAGCCTGCACCGGAGCATCCATGAACCCCGCCGTGTCATTCGGGCCTGCTGTGGTGAGCTG
GAGCTGGGCCAACCACTGGATCTACTGGGCCGGCCCACTTATCGGTGGTGGGCTTGCTGGGCTTATCTATGAGGTTCTCT
TCATTAACAGCACCCATGAGCAGCTTCCAACCACTGACTACTACATGGGAAGTGAAAATGGAACTGAAATTTGAAATTGT
GTATTATTGAATTCTCTTCTGTGCATGTCTTTATTTTCTTGTGTACCTCGGCCGAGACCACGC




Most similar to sp|Q9FY14|TIP1_MEDTR

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9FY14|TIP1_MEDTR Probable aquaporin TIP-type OS=Medicago
           truncatula GN=AQP1 PE=1 SV=1
          Length = 250

 Score =  126 bits (317), Expect = 4e-29
 Identities = 61/92 (66%), Positives = 63/92 (68%)
 Frame = +3

Query: 6   YATAVDPKKGNXXXXXXXXXXXXXXXNILVGGACTGASMNPAVSFGPAVVSWSWANHWIY 185
           YATAVDPKKGN               NILVGGA TGASMNPAVSFGPAVVSWSW+NHW+Y
Sbjct: 159 YATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVY 218

Query: 186 WXXXXXXXXXXXXXYEVLFINSTHEQLPTTDY 281
           W             YEVLFINSTHEQLPTTDY
Sbjct: 219 WAGPLIGGGIAGLVYEVLFINSTHEQLPTTDY 250