miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|22674418|gb|BU160497.1|BU160497 TGACAGTATTATTTATTAGGGGTAGCCTTAAGTCTTCTCTCACCCTAGATCTCACTGGTCACCAAGCCCCATCAATTCCG
TATCCTTAACATCTCTCGGGTGGATCCCTTATCTATTTGCATGGGTTTCACCACTTGTCACTGGGATTATTATAATAACT
TACTTACTGATCTCCCTATCTCCGAGCTTACTCATCTCTTATCTACCTTCAATGCTCTCACTTGAATCGTCTTTCAAAGT
ACAGATCTTAATATACAGCTTTTCAATCTTCAGTGGCTTCCCTTAGAAAAGCCCACCTTCTTAAAATAGCATGCAGGGTG
TTCATGATCTGTTTCTCTCTCTGCCATACCAAAACATCCATAGCTCTATAACCTATTATCACATGTACATGACATATTTA
TAATTACTTTTTATATATTTTTCTTAACCAAGACCATAAATTCATAAGTGACATGGACTTAGTTTTATTTACCTTTTATG
TTCTCAATACCAACCAGTGTTTAGCACATAGAAAGCATCAATAAATATTTTCTAGAAGCAAAAATGGTCAGAAAATTTAT
ATACATATTAGTAAACATACTAACATTGTCTGGCATATAAAGCTTCTCAGTAAATGTTTAGTGGATGATAGATGAGCTAT
TGCTGTTTAATGATAATGACCAAAAAAACCCCACAACTTTTTCTTACTTTGTCTGCAAGGAATTGTTGGCGACGCTCTTC
AATAAGTTTTTCCACAGCCCTCCTGTGTTCCAGCTGCTTCATTCTTTGTTTCTGAGCATTCATTAATTCTATTCGATCAT
CCTCAGCAAATTTAGCTAGCATAGTTTTTCTAAAGTTCTCCCTCTTCCTCTTTTGCAGCCTGTAGCACTAATTCCTTCAG
GCCATTTGTTCCTTCAAATCCTTGCTTCATCTCTTTTTGCTTTTCCCATTTTCTTTT




Most similar to sp|Q8NEH6|MNS1_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8NEH6|MNS1_HUMAN Meiosis-specific nuclear structural protein 1
           OS=Homo sapiens GN=MNS1 PE=2 SV=2
          Length = 495

 Score =  115 bits (287), Expect = 6e-25
 Identities = 63/90 (70%), Positives = 70/90 (77%), Gaps = 4/90 (4%)
 Frame = -2

Query: 936 KENGKSKKR*SKDLK----EQMA*RN*CYRLQKRKRENFRKTMLAKFAEDDRIELMNAQK 769
           KE  + K R  K++K    EQMA +    +  K + ENFRKTMLAKFAEDDRIELMNAQK
Sbjct: 337 KEEAEKKLRKQKEMKQDFEEQMALKELVLQAAKEEEENFRKTMLAKFAEDDRIELMNAQK 396

Query: 768 QRMKQLEHRRAVEKLIEERRQQFLADKVRK 679
           QRMKQLEHRRAVEKLIEERRQQFLADK R+
Sbjct: 397 QRMKQLEHRRAVEKLIEERRQQFLADKQRE 426