miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|22907364|gb|BU557068.1|BU557068 TGGTTGGTCAGTGGGGAGTCGGCGCCTGCGTACTAAGACCCGTGTGCAGCAGCGGCGGCGGCGGTAGAGGCGGCGGCGGC
GGCGGCAGCGGGCTCGGAGGCAGCGGTTGGGCTCGCGGCGAGCGGACGGGGTCGAGTCAGTGCGTTCGCGCGAGTTGGAA
TCGAAGCCTCTTAAAATGGCAGATGACTTGGACTTCGAGACAGGAGATGCAGGGGCCTCAGCCACCTTCCCAATGCAGTG
CTCAGCATTACGTAAGAATGGCTTTGTGGTGCTCAAAGGCCGGCCATGTAAGATCGTCGAGATGTCTACTTCGAAGACTG
GCAAGCACGGCCACGCCAAGGTCCATCTGGTTGGTATTGACATCTTTACTGGGAAGAAATATGAAGATATCTGCCCGTCA
ACTCATAATATGGATGTCCCCAACATCAAAAGGAATGACTTCCAGCTGATTGGCATCCAGGATGGGTACCTATCACTGCT
CCAGGACAGCGGGGAGGTACGAGAGGACCTTCGTCTCCCTGAGGGAGACCTTGGCAAGGAGATTGAGCAGAAGTACGACT
GTGGAGAAGAGATCCTGATCACGGTGCTGTCTGCCATGACAGAGGAGGCAGCTGTTGCCATCAAGGCCATGGCAAAATAA
CTGGCTCCCCAGGTGGCGGTGGTGGCAACAATGATCCCTCTGAACCTGCGAAGGCCCCCCTCCCCGACCCTGGCCTGGGT
CTTGGGCCGGTCCTAAGGCTGAACTCCTCCTACACAATTTTATTTGAAGGTTTTATTTTTTGGTTTTCCCCCACCCCCCT
CCAATCTGGGCGGGGGGAGCCCCTGGCCCCTTTACCTTAAATTCCCCTTTGGGCCAGAGAACCCAGCCCAACACTTGGGG
CCCCTTGGGGGGAAAGCGTGCCCCTCCTCTTTTTCTCCCCCTTAAAACTTAAAGGACCCTGGGTGGGGGGAAGAAAAGGG
GGGGTGGGCGGTTCTCCA




Most similar to sp|Q3T1J1|IF5A1_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q3T1J1|IF5A1_RAT Eukaryotic translation initiation factor 5A-1
          Length = 154

 Score =  311 bits (797), Expect = 5e-84
 Identities = 154/154 (100%), Positives = 154/154 (100%)
 Frame = +2

Query: 176 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG 355
           MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG
Sbjct: 1   MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG 60

Query: 356 IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLG 535
           IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLG
Sbjct: 61  IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLG 120

Query: 536 KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK 637
           KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK
Sbjct: 121 KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK 154