miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|255408471|gb|FS556289.1|FS556289 AAGGATTCAGCTGGAAGAAGTTATTGCTGCTTCTAAAGACTCCCAGTCAGCTCACAAACTTGAAAAATCAGAATTGCTAA
CAAGTTGAAGGACAGAATATGTATGAAAATGATCCAAGCATTAACAATGTGTCATGTTTGCACAGTAACATCTACAATTG
ATAATAATGAACAATATCCATAAATGCAGCTGAATTCTTAAAAATATATACAAATTCCATTGAGTTAAATCTTTGGAGAG
AAAACAGACCCACCCACATCTCACATTGACTTATTGATAAACTGAAATATTCCTTCTCAGTCTTCAGCTGACACCAGCGG
CCGAGTCTTAGTAACTGAACCAAGCGGGTCTCTTCCTGGGTCTCTCCACTATCCTCTTGTCTTTATCCTGGTTGCTTGGC
GTTTCCCCCTCATACAGGACCACAGTCTCCACGGTTGGGGCCCTCAGCGGGCCGCCTTCCATCGCATTTATCTGTTGACG
AATCAGAGCCGTCTCTCTGCTCACTTTAGCGTAGCAGAACCCACACAGGGTGTGCTTCTGCTTCAGGTGGCCGCACTCCA
GACACGGCTCGATGTTGTTCTTCACTTTAATAAGTTTGCTTTCAGATCTCCTCCTGGTGCGGTTGACCTCTATGGTGCGC
CTCTTCTTTGGTGCTGCCATCCAGAGGATGCTGTCCAGGAGGCCAGTGGGCTGCTCCTGGCTCTCCTGCTGCTCTTCCAG
CTGGTTCTCCGGGTGGAGCTGAGGAGGGAGGCTGGGGNCCGTCCACTGCCAGCGCTGGGGCCAGGTT




Most similar to sp|Q9BYC8|RM32_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9BYC8|RM32_HUMAN 39S ribosomal protein L32, mitochondrial
           OS=Homo sapiens GN=MRPL32 PE=1 SV=1
          Length = 188

 Score =  158 bits (399), Expect = 5e-38
 Identities = 75/118 (63%), Positives = 87/118 (73%)
 Frame = -2

Query: 687 TGLLDSILWMAAPKKXXXXXXXXXXXRSESKLIKVKNNIEPCLECGHLKQKHTLCGFCYA 508
           + LLDSI WMAAPK            R+  KLIKVKNNI+ C ECGHLKQKH LC +CY 
Sbjct: 69  SSLLDSIFWMAAPKNRRTIEVNRCRRRNPQKLIKVKNNIDVCPECGHLKQKHVLCAYCYE 128

Query: 507 KVSRETALIRQQINAMEGGPLRAPTVETVVLYEGETPSNQDKDKRIVERPRKRPAWFS 334
           KV +ETA IR+QI   EGGP +APT+ETVVLY GETPS QD+ KRI+ER RKRP+WF+
Sbjct: 129 KVCKETAEIRRQIGKQEGGPFKAPTIETVVLYTGETPSEQDQGKRIIERDRKRPSWFT 186