miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|25557635|gb|CA741812.1|CA741812 GCACGAGGCAAGAATCAATCAACCAACCAACCGACGGGAGATGGCTTCATCGAGCAGATGCTGGTGGCGGCGGCGGTGGC
CGCCCTGGTGGCCGTGGCGTGGTGCGCGCCGCCGCCGGTGAGCTTCACGGTGGAGAAGGGGTCCGACAAGACGCATCTGG
CGCTGCAGATCAAGTACGACAAGGCCGGCGACAGCATGAAGGAGGTGGAGCTGAAGCAGAAGGAGGACTGGCTGCCCCTG
AAGAAGGGCTACAGCGGCGCGTGGGAGATCAAGAGCGACAAGCCCCTCGAGGGCCCCTACAGCTTCCGCTACGAGACCGA
GAAGGGCCAGCGCAACGTCTTCGACGACGTCATCCCCACAGATTTCAAGTGCGGCTCCACCTACAAGCCAGAGGCGACCT
ACTGAGATTCACCCATGCATCGGTTCCGCCATCATCGATCGACCTCGCAACTAAGATCGTGTCATAAGACGCACGTACGG
ATACTAATAAGTTACTCTCTCTGTAAACTAATATAAGAATGTTTAGATTACTACTTTAGTATTCTAAACGCTCTTATATT
AGTTTACGGAGGTAGTAGATAATATTACCTTCGTCCTGAATTAATTGTCTAATTNNNGACGANNNNNNTANTNN




Most similar to sp|P14947|MPAL2_LOLPR

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P14947|MPAL2_LOLPR Pollen allergen Lol p 2-A OS=Lolium perenne
           PE=1 SV=1
          Length = 97

 Score =  138 bits (348), Expect = 3e-32
 Identities = 65/95 (68%), Positives = 77/95 (81%), Gaps = 2/95 (2%)
 Frame = +1

Query: 115 PVSFTVEKGSDKTHLALQIKYDKAGDSMKEVELKQ--KEDWLPLKKGYSGAWEIKSDKPL 288
           PV FTVEKGSD+ +LAL IKY+K GDSM EVELK+    +WL LKK   G WEIKSDKPL
Sbjct: 3   PVEFTVEKGSDEKNLALSIKYNKEGDSMAEVELKEHGSNEWLALKKNGDGVWEIKSDKPL 62

Query: 289 EGPYSFRYETEKGQRNVFDDVIPTDFKCGSTYKPE 393
           +GP++FR+ +EKG RNVFDDV+P DFK G+TYKPE
Sbjct: 63  KGPFNFRFVSEKGMRNVFDDVVPADFKVGTTYKPE 97