miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|259086848|gb|GH307727.1|GH307727 CAGGGAATGGATAACCATTTTAACTGTATTTTTTGCAGCCCATACCTTCTTGGGAATACAATTGTCTAACTTTTTATTTT
TGGTCTGGCTGTTGTGGTGTGCAAAACCCTGTACATTGCTATTTTGCCACACTGCAACACCTTACAGATGTGGAAGATGT
GAAATTTGTCATCAATTATGACTACCCTAACTCCTCAGAGGATTATATTCATCGAATTGGAAGAACTGCTCGCAGTACCA
AAACAGGCACAGCATACACTTTCTTTACACCTAATAACATAAAGCAAGTGAGCGACCTTATCTCTGTGCTTCGGGAAGCT
AATCAAGCAATTAATCCTAAGTTGCTTCAGTTGGTCGAAGACAGAGGTTCAGGTCGTTCCAGGGGTAGAGGAGGCATGAA
GGATGACCGGCGGGACAGATACTCTGCGGGCAAGAGGGGTGGATTTAATACATTTAGAGACAGGGAAAATTATGACCGCG
GTTACTCTAGTCTGCTTAAGAGAGATTTTGGGGCAAAAACTCAGAATGGTGTTTACAGTGCTGCAAATTACACCAATGGG
AGCTTTGGAAGTAATTTTGTGTCTGCTGGTATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACC




Most similar to sp|Q4R6M5|DDX5_MACFA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q4R6M5|DDX5_MACFA Probable ATP-dependent RNA helicase DDX5
           OS=Macaca fascicularis GN=DDX5 PE=2 SV=1
          Length = 614

 Score =  281 bits (720), Expect = 2e-75
 Identities = 142/162 (87%), Positives = 142/162 (87%)
 Frame = +3

Query: 147 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 326
           DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 465

Query: 327 AINPKLLQLVEXXXXXXXXXXXXXXXXXXXXYSAGKRGGFNTFRDRENYDRGYSSLLKRD 506
           AINPKLLQLVE                    YSAGKRGGFNTFRDRENYDRGYSSLLKRD
Sbjct: 466 AINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRD 525

Query: 507 FGAKTQNGVYSAANYTNGSFGSNFVSAGIQTSFRTGNPTGTY 632
           FGAKTQNGVYSAANYTNGSFGSNFVSAGIQTSFRTGNPTGTY
Sbjct: 526 FGAKTQNGVYSAANYTNGSFGSNFVSAGIQTSFRTGNPTGTY 567