miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|27387026|gb|CA900034.1|CA900034 GGCTCTTCTTCACTCCTCTTTCGTCTTCTCTCACTCTTTCTTCTTCACGAACAACACATCGCAGTCAAAGATTTTATTTT
CATCAATCAATGGCGCCAGCAGCTGCAGCATCTTCAGATGATATAAAACCCAGAGATGTTTGCATTGTTGGTGTTGCGCG
TACCCCGATGGGGGGATTTCTTGGTACTCTGTCATCTCTGTCTGCCACCAAACTAGGCTCTATAGCTATTGAAGCTGCTC
TTAAAAGGGCCAATGTTGATCCATCCCTTGTGGAGGAAGTAATTTTTGGGAATGTTCTTAGTGCTAATTTGGGGCAGGCT
CCTGCAAGACAAGCTGCTCTCGGAGCAGGAATACCCAATTCAGTGGTCTGCACTACT




Most similar to sp|Q8S4Y1|THIC1_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8S4Y1|THIC1_ARATH Acetyl-CoA acetyltransferase, cytosolic 1
           OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1
          Length = 403

 Score =  154 bits (388), Expect = 2e-37
 Identities = 75/87 (86%), Positives = 83/87 (95%)
 Frame = +3

Query: 117 DDIKPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVEEVIFGNV 296
           + + PRDVCIVGVARTPMGGFLG+LSSL ATKLGS+AI AALKRANVDP+LV+EV+FGNV
Sbjct: 6   ESVNPRDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFGNV 65

Query: 297 LSANLGQAPARQAALGAGIPNSVVCTT 377
           LSANLGQAPARQAALGAGIPNSV+CTT
Sbjct: 66  LSANLGQAPARQAALGAGIPNSVICTT 92