miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|282741193|gb|GW293248.1|GW293248 GAGGGACGGTGTGAAAGCGGTAAGATGGCGGCGGCGGCGGTGGTGGAGTTCCAGAGAGCCCAGTCTCTACTCAGCACCGA
CCGGGAGGCCTCCATCGACATTCTCCACTCCATCGTGAAGCGTGACATTCAGGAGAATGATGAGGAGGCAGTGCAGGTCA
AAGAGCAGAGTATCCTGGAACTGGGGTCTCTCTTGGCGAAGACTGGACAAGCTGCGGAGCTTGGAGGACTCCTGAAGTAT
GTGCGACCCTTCTTGAATTCCATCAGCAAGGCTAAGGCAGCTCGTCTGGTCCGATCTCTTCTTGATCTGTTTCTTGATAT
GGAAGCAGCTACAGGGCAGGAGGTCGAGTTGTGTTTAGAGTGCATTGAATGGGCCAAATCAGAGAAGCGAACTTTCTTAC
GCCAAGCTTTGGAGGCAAGACTGGTGTCTTTGTACTTTGATACCAAGAGGTACCAGGAAGCATTGCATTTG




Most similar to sp|Q8BG32|PSD11_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8BG32|PSD11_MOUSE 26S proteasome non-ATPase regulatory subunit
           11 OS=Mus musculus GN=Psmd11 PE=1 SV=3
          Length = 422

 Score =  282 bits (722), Expect = 6e-76
 Identities = 149/149 (100%), Positives = 149/149 (100%)
 Frame = +1

Query: 25  MAAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKT 204
           MAAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKT
Sbjct: 1   MAAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKT 60

Query: 205 GQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSE 384
           GQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSE
Sbjct: 61  GQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSE 120

Query: 385 KRTFLRQALEARLVSLYFDTKRYQEALHL 471
           KRTFLRQALEARLVSLYFDTKRYQEALHL
Sbjct: 121 KRTFLRQALEARLVSLYFDTKRYQEALHL 149