miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|29549773|gb|CB610160.1|CB610160 CTTGCGGCCGCAAAGGTTTTTTTTTTTTTTTTTTTATTAATTTCATTTTAACATTTTGTTTTTCCTACCCTGCCCTTTTT
CTACCTCAATGGTGTTCCTACAGGAAATGGATAACCATTTTAACTGTATTTTTTTCAGCCCGTACCTTCTTGGGAATACA
ATTGTCTAACTTTTTATTTTTGGTCTGGCTGTTGTGGTGTGCAAAACTCCGTACATTGCTATTTTGCCACACTGCAACAC
CTTACAGATGTGGAAGATGTGAAATTTGTCATCAATTATGACTACCCTAACTCCTCAGAGGATTATATTCATCGAATTGG
AAGAACTGCTCGCAGTACCAAAACAGGCACAGCATACACTTTCTTTACTCCCAATAACATAAAGCAAGTGAGCGACCTCA
TCTCTGTGCTTCGGGAAGCCAATCAAGCAATTAATCCCAAGTTGCTTCAGTTGGTCGAAGACAGAGGTTCAGGTCGTTCC
AGGGGTAGAGGAGGCATGAAGGATGATCGTCGTGACAGATACTCTGCAGGGAAAAGGGGTGGATTTAATACCTTTAGA




Most similar to sp|Q5R4I9|DDX5_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5
           OS=Pongo abelii GN=DDX5 PE=2 SV=1
          Length = 614

 Score =  163 bits (413), Expect = 6e-40
 Identities = 84/104 (80%), Positives = 84/104 (80%)
 Frame = +1

Query: 247 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 426
           DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ
Sbjct: 406 DVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQ 465

Query: 427 AINPKLLQLVEXXXXXXXXXXXXXXXXXXXXYSAGKRGGFNTFR 558
           AINPKLLQLVE                    YSAGKRGGFNTFR
Sbjct: 466 AINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFR 509