miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|29687405|gb|CB683680.1|CB683680 ATCTTGCAAGGGAAAAAGGCTTATACTCCCTTCGAATTCGAAATATTTGACACCGTTGACTTTTTAGCACATGTTTGACT
GTTCGTCTTATTCAAAAACTTTTATGAAATATGTAAAATTATATGCCTACATGAAAATATATTTAACAATGAATCAAATG
ATAGGAAAAGAATTATTAAGTGTCAAAATTTTTTGAATAAGACGAACGGTCAAACATGTAATAAAAAGTCAACGGCGTCA
AACATTCCGAAACGGAGGGAGTATGTAGGAGCAGCATAACACACATAGAATTTCCACATTAGAAGCTTACGTAGAATAAG
TTACTCCCAAATAAACACGCTACAAAAATAAGGTCCAGATATTTCTTTGATATATTCTCTTGCACTGACAGACAAAAGCC
GGTCCCAGAGCGACAGGTCTATTTTAAGAGGAAAAGCTTGGTTTCAACTGATCCTTTTCACTTCTAGGTGGAACACACCA
ACTTAGAACACCCTGATTGGTTTCCCCATGGTGCTCTTGATGTAAAGGCACCTCACATTCTGCCAGTTCTTTTTCAAAAG
GGACACGAGGAAGTTGACGCTCATTTGGATGTTTTGCTGGATCTGCTTCTCCTCCATTGACAAGTTACCCACAGCAACAC
CCATGCACAGAACCTTCTTCAGCTGGAACTTGACTGT




Most similar to sp|P59231|R10A3_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P59231|R10A3_ARATH 60S ribosomal protein L10a-3 OS=Arabidopsis
           thaliana GN=RPL10AC PE=2 SV=1
          Length = 217

 Score =  120 bits (301), Expect = 8e-27
 Identities = 59/64 (92%), Positives = 61/64 (95%)
 Frame = -1

Query: 677 TVKFQLKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKP 498
           TVKFQLKKVLCMGVAVGNLSMEEKQI QN+QMSVNFLVSLLKKNWQNVRCLY+KSTMG P
Sbjct: 154 TVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPP 213

Query: 497 IRVF 486
            RVF
Sbjct: 214 NRVF 217