miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|297762131|gb|FN889260.1|FN889260 AATCTTGCTTGTGGTATTAAACGAAGAGAACTCTGGCTTGTGTAATTAAACCGAGACTGCGTGATTAAGCCATCTTAATC
CAATACGTTCCGGTGCAAGTGAGACAAGTTGTTCTTCTCCGAGTGGATGTCTCCCAACATTTGATGCACATCCATCAACA
TCAGTGAATACAATTCGATTTCCGGAGTTAGCTTGATCGTTTCTTTGAAAGTTGAGACGAGTTATATTGTGCCAGTGTTC
GAGTGCAAGTTCGATGATTCTTTGTTCGCGTTGGGTGTGACTTCCCTCTAATGCATAAATTATCGGTCGACTGGCGTCCC
ATCTTCTCAAGTTAGACCCAATGGGTTTTCTCTTTCCTCTTGTTTTTCCTTCAGTTAGTGCTTGGTCATAAAGAGCCTTT
GCTTGCTCTGGCATGAGGACGATATCTCCTCGGAAGAGTTTCGCCGGCTCTCCCGGATTCCGCACCATATCTGCCCTGGC
GATTCCTTGCTTCCAACTCTGGAATCTTGGTGTCGGTCGGGGTTCCCCTGGGTGGCTTCGCGGTCGGCCAAGTTAATCGG
ATCTATCCCCCGGTGGGGCCGGGGGGTTGTGTGGTTGTGTGGTTGAGCTGGGTGTCCGGTTTTCTTTCGCCGTGGCCCGC
GAGTGGGGGGGCTCGCCCCTCTGTCTTTCTTGTTAGGATCCTCATGGTTGGGGGGCTCGTCTGTGGGGGCGTTGGTCAGG
ATTGGTAGGATTTGTTTTCCCGCCGGCGTCCCCCTTGCGTTTATACCACCTGTTATCGTTCGTGGTCATGGGTATTGTTC
CTCCGTGCCG




Most similar to sp|P98060|NAS35_CAEEL

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P98060|NAS35_CAEEL Zinc metalloproteinase dpy-31
           OS=Caenorhabditis elegans GN=dpy-31 PE=1 SV=2
          Length = 592

 Score =  236 bits (602), Expect = 1e-61
 Identities = 121/158 (76%), Positives = 129/158 (81%)
 Frame = -1

Query: 525 EPRPTPRFQSWKQGIARADMVRNPGEPAKLFRGDIVLMPEQAKALYDQALTEGKTRGKRK 346
           E    P   +W +   + D V NP E  K F+GDIVL PEQAKALY+QALTEGKTR KRK
Sbjct: 71  ERHKNPELVAWDR---KRDSVLNPEEQGKFFQGDIVLYPEQAKALYEQALTEGKTRVKRK 127

Query: 345 PIGSNLRRWDASRPIIYALEGSHTQREQRIIELALEHWHNITRLNFQRNDQANSGNRIVF 166
            IGSNLRRWDASRPIIYA +GSHTQREQRIIELALEHWHNIT LNFQRNDQANSGNRIVF
Sbjct: 128 FIGSNLRRWDASRPIIYAFDGSHTQREQRIIELALEHWHNITCLNFQRNDQANSGNRIVF 187

Query: 165 TDVDGCASNVGRHPLGEEQLVSLAPERIGLRWLNHAVS 52
           TDVDGCASNVGRHPLGEEQLVSLAPE I L  + H V+
Sbjct: 188 TDVDGCASNVGRHPLGEEQLVSLAPECIRLGVIAHEVA 225