miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|300054322|gb|FP918340.1|FP918340 TTCGTCTCAGACCATAATGTTCGTTAGTTAACTTAAATTCATCAGACCCATGTGACATGATGGTGCGGTGAAAATTCTCA
TTACATTTTTGTAGGTTATATTCCATATAACCTACCAATAAATATACCTTCCTATTGCATTTTCATATTCCTGCACTTCA
AGATACAAATACACAACGGTATTGCAAGATGTCAGTTCTATATGAAAAAGTGTCCGATCTCTTAAAATGGATAGACAAAA
ATGGAGATTCAAGAATTAAAGATTATTGGTTAATGGATTCTCCATGGCCAGTTGTGATAATTCTTGCCGCTTATCTATAC
TTTGTTCTGAAGGCTGGTCCAAAGTTCATGAAGAATCGTAGCCCATTGAAAATTGATCGTATTGTAATGGTGTACAATGT
TGTCCAAGTTTTATTTTCAGCCTATCTAGTGAAAGAGGCTTTTCGGTTAATATGGCTTCAAAACGACTACAAAATAAACT
GCATTGAAATTGATTACAGTGACACAGATAAAGCCAAAGACATAGTTTGTGCTGTGTGGACTTACTTCTTCTCTAAAGTC
TTAGATTTACTCGACACGATATTCTTCGTGTTACGTAAAAAGCAAAATCAAGTGACGTTTTTACACATCTATCATCATAC
AATGGTCCTGATGTTTAGCTGGGGTATAATAAAATTCTATCCAGGAGGACAAATCATCTTGTTTGGAACCATAAATGCAT
TTGTTCACGTTGTCATGTACAGTTACTACTTCTTGGACCTATTGAAACCAGAGTACCAAAAAAGCATGGTGAAAAAAATA
TTTGACACAATTTACACTGGATTCATTCGTTACCACGGGTCTTCCCGGATGTGTAAACATTATGGCAACGGGCTGCAGTT
ATCCCAAATTTGTATAAGCGTTAGCATTCCACAAGAATTGTTTTTGTTGGTTTTGTCCGGGGATTTTTACAAAAACCTTA
AAAAAAACCCAAAAAAAACTGAATTAAATTATTTTTTTC




Most similar to sp|Q1HRV8|ELVL1_AEDAE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids
           protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2
           SV=2
          Length = 358

 Score =  176 bits (447), Expect(2) = 2e-45
 Identities = 82/198 (41%), Positives = 121/198 (61%)
 Frame = +3

Query: 189 MSVLYEKVSDLLKWIDKNGDSRIKDYWLMDSPWPVVIILAAYLYFVLKAGPKFMKNRSPL 368
           M+++ + +  +  ++DK GD R KD+ LM SP+P + +   Y+Y V   GP+ M+NR P 
Sbjct: 1   MALIMKYIDSMHHYMDKYGDPRTKDWPLMSSPFPTLALCLGYVYLVKVLGPRLMENRKPF 60

Query: 369 KIDRIVMVYNVVQVLFSAYLVKEAFRLIWLQNDYKINCIEIDYSDTDKAKDIVCAVWTYF 548
           ++   +++YN VQV+FSA+L  E     WL   Y   C  +DYS+  K   +V A W Y+
Sbjct: 61  QLRNTLILYNFVQVVFSAWLFYEIGISGWLTGHYNFRCQPVDYSNHPKTLRMVHACWWYY 120

Query: 549 FSKVLDLLDTIFFVLRKKQNQVTFLHIYHHTMVLMFSWGIIKFYPGGQIILFGTINAFVH 728
           FSK  +  DT FFV+RKK +QV+ LH+ HH  + M  W  +KF PGG    FG +N FVH
Sbjct: 121 FSKFTEFFDTFFFVMRKKTSQVSTLHVIHHGCMPMSVWFGVKFTPGGHSTFFGLLNTFVH 180

Query: 729 VVMYSYYFLDLLKPEYQK 782
           +VMY+YY    + P++QK
Sbjct: 181 IVMYTYYLFTAMGPQFQK 198



 Score = 27.7 bits (60), Expect(2) = 2e-45
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 769 QSTKKAW*KKYLTQFTLDSFVTTGLPGCVNIMATGCSYPK-FV*ALAFHKNCF 924
           Q  K  W KKYLT   +  FV   +     ++   C+YPK FV  +  H   F
Sbjct: 195 QFQKYLWWKKYLTSLQMVQFVAI-MVHAFQLLFIDCNYPKAFVWWIGMHAVMF 246


>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids
           protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1
          Length = 281

 Score =  172 bits (437), Expect = 3e-42
 Identities = 88/185 (47%), Positives = 114/185 (61%)
 Frame = +3

Query: 228 WIDKNGDSRIKDYWLMDSPWPVVIILAAYLYFVLKAGPKFMKNRSPLKIDRIVMVYNVVQ 407
           WI K+ D R++DY LM SP P  IIL  Y+YFV   GPK M+NR P ++ + ++ YN   
Sbjct: 17  WI-KDADPRVEDYLLMSSPLPQTIILGLYVYFVTSLGPKLMENRKPFELKKAMITYNFFI 75

Query: 408 VLFSAYLVKEAFRLIWLQNDYKINCIEIDYSDTDKAKDIVCAVWTYFFSKVLDLLDTIFF 587
           VLFS Y+  E     W    Y   C  +DYS + +A  +V   W Y+FSK ++LLDTIFF
Sbjct: 76  VLFSVYMCYEFVMSGW-GTGYSFRCDIVDYSQSPRAMRMVHTCWLYYFSKFIELLDTIFF 134

Query: 588 VLRKKQNQVTFLHIYHHTMVLMFSWGIIKFYPGGQIILFGTINAFVHVVMYSYYFLDLLK 767
           VLRKK +QVTFLH++HHT++    W  +KF  GG       +N  VHVVMYSYY L  + 
Sbjct: 135 VLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHAFLNTAVHVVMYSYYGLCAMG 194

Query: 768 PEYQK 782
           P YQK
Sbjct: 195 PAYQK 199