miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|308625712|gb|DK457629.1|DK457629 GGCAAAAAACATCTCATAGTTTCTAAAAAAAATCAAGATTAATCTATACTCTTCAACAATGTCATCATCATCATCATCTT
ACTTGAGAGATGAAGATCTGACACAAGAAACAAGAGATCTGATCTCTTCTCTTCCAAGCGAGAAAGGTTGGTTGGTGAGC
CAAATGTATCAGTTTCAAGGACGTTGGCACACACAAGCCCTCTTACAAGGACTCTTGCAATACCAAAAACACTTTGAGGC
CAAAGATTCCGACATTATCCTCGTCACCAATCCTAAATCAGGTACCACTTGGTTAAAAGCTCTTGTCTTTTCTCTCATTA
ACCGACACAAGTTTCCAGTTTCTTCTGGTGATCATCCTCTTCTTGTTACCAATCCGCACCTTCTCATACCCTTCTTGGAA
GGAGTTTACTACGAGTCTCCAAATTTCGATTTCACTGAGTTGCCTTCTCCAAGACTCATGAACACACACATATCGCTTCT
TTCCCTGCCCGAGTCCGTTAAGAGCTCCTCTTGTAAGATTGTGTATTGTTGTAGGAACCCTAAGGACATGTTTGTGTCCT
TATGGCATTTTGGAAAGAAACTTGCTTCTCAAGAAACTGCTGATTATCCTATTGAAAAAGCGGTTGAAGCGTTTTGTCAA
GGGAAGTTTATAGGTGGACCCTTTTGGGATCATGTGCTGGAGTACTGGTATGCCAGCCTTGAGAATCCGAACAAGGTCTT
ATTTGTTACATACGAGGAGCTGAGAAGCAGACTGGAGATACGATCAAGAGATAGCCGAATTCTTGGGATGTGGTTTTATT
GAAGAAGAAAAGTCGGAGGG




Most similar to sp|P52839|FSTL_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P52839|FSTL_ARATH Flavonol sulfotransferase-like OS=Arabidopsis
           thaliana GN=At2g03760 PE=1 SV=2
          Length = 326

 Score =  409 bits (1050), Expect(2) = e-115
 Identities = 193/219 (88%), Positives = 207/219 (94%), Gaps = 1/219 (0%)
 Frame = +2

Query: 80  YLRDEDLTQETRDLISSLPSEKGWLVSQMYQFQGRWHTQALLQGLLQYQKHFEAKDSDII 259
           YL DEDLTQETR LISSLP EKGWLVS++Y+FQG WHTQA+LQG+L  QK FEAKDSDII
Sbjct: 10  YLGDEDLTQETRALISSLPKEKGWLVSEIYEFQGLWHTQAILQGILICQKRFEAKDSDII 69

Query: 260 LVTNPKSGTTWLKALVFSLINRHKFPVSS-GDHPLLVTNPHLLIPFLEGVYYESPNFDFT 436
           LVTNPKSGTTWLKALVF+L+NRHKFPVSS G+HPLLVTNPHLL+PFLEGVYYESP+FDF+
Sbjct: 70  LVTNPKSGTTWLKALVFALLNRHKFPVSSSGNHPLLVTNPHLLVPFLEGVYYESPDFDFS 129

Query: 437 ELPSPRLMNTHISLLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLASQETADYPIE 616
            LPSPRLMNTHIS LSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLA +ETADYPIE
Sbjct: 130 SLPSPRLMNTHISHLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLAPEETADYPIE 189

Query: 617 KAVEAFCQGKFIGGPFWDHVLEYWYASLENPNKVLFVTY 733
           KAVEAFC+GKFIGGPFWDH+LEYWYAS ENPNKVLFVTY
Sbjct: 190 KAVEAFCEGKFIGGPFWDHILEYWYASRENPNKVLFVTY 228



 Score = 28.9 bits (63), Expect(2) = e-115
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 765 QEIAEFLGCGFIEEEK 812
           + IAEFL CGFIEEE+
Sbjct: 240 KRIAEFLECGFIEEEE 255


>sp|Q9FZ80|SOT17_ARATH Sulfotransferase 17 OS=Arabidopsis thaliana
           GN=SOT17 PE=1 SV=1
          Length = 346

 Score =  179 bits (453), Expect = 3e-44
 Identities = 92/208 (44%), Positives = 130/208 (62%), Gaps = 1/208 (0%)
 Frame = +2

Query: 113 RDLISSLPSEKGWLVSQMY-QFQGRWHTQALLQGLLQYQKHFEAKDSDIILVTNPKSGTT 289
           +++I++LP + GW     + ++ G W  Q LL+GLL  QK F+A+ +D  + + PK+GTT
Sbjct: 34  QEIIATLPHKDGWRPKDPFVEYGGHWWLQPLLEGLLHAQKFFKARPNDFFVCSYPKTGTT 93

Query: 290 WLKALVFSLINRHKFPVSSGDHPLLVTNPHLLIPFLEGVYYESPNFDFTELPSPRLMNTH 469
           WLKAL F++ NR KF VS+  +PLL  NPH  +P++E  +   P+ D  +     L +TH
Sbjct: 94  WLKALTFAIANRSKFDVST--NPLLKRNPHEFVPYIEIDFPFFPSVDVLKDEGNTLFSTH 151

Query: 470 ISLLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLASQETADYPIEKAVEAFCQGKF 649
           I    LPESV  S CKIVY  R+PKD FVS+W F  K  SQ+     IE+A + +CQG  
Sbjct: 152 IPYDLLPESVVKSGCKIVYIWRDPKDTFVSMWTFAHKERSQQGPVVSIEEAFDKYCQGLS 211

Query: 650 IGGPFWDHVLEYWYASLENPNKVLFVTY 733
             GP+ DHVL YW A   NP+++LF+ Y
Sbjct: 212 AYGPYLDHVLGYWKAYQANPDQILFLKY 239