miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|308715938|gb|DK459410.1|DK459410 GATGCAAAAAACATCTCATAGTTTCTAAAAAAAATCAAGATTAATCTATACTCTTCAACAATGTCATCATCATCATCATC
TTACTTGAGAGATGAAGATCTGACACAAGAAACAAGAGATCTGATCTCTTCTCTTCCAAGCGAGAAAGGTTGGTTGGTGA
GCCAAATGTATCAGTTTCAAGGACGTTGGCACACACAAGCCCTCTTACAAGGACTCTTGCAATACCAAAAACACTTTGAG
GCCAAAGATTCCGACATTATCCTCGTCACCAATCCTAAATCAGGTACCACTTGGTTAAAAGCTCTTGTCTTTTCTCTCAT
TAACCGACACAAGTTTCCAGTTTCTTCTGGTGATCATCCTCTTCTTGTTACCAATCCGCACCTTCTCATACCCTTCTTGG
AAGGAGTTTACTACGAGTCTCCAAATTTCGATTTCACTGAGTTGCCTTCTCCAAGACTCATGAACACACACATATCGCTT
CTTTCCCTGCCCGAGTCCGTTAAGAGCTCCTCTTGTAAGATTGTGTATTGTTGTAGGAACCCTAAGGACATGTTTGTGTC
CTTATGGCATTTTGGAAAGAAACTTGCTTCTCAAGAAACTGCTGATTATCCTATTGAAAAAGCGGTTGAAGCGTTTTGTC
AAGGGAAGTTTATAGGTGGACCCTTTTGGGATCATGTGCTGGAGTACTGGTATGCCAGCCTTGAGAATCCGAACAAGGTC
TTATTTGTTACATACGAGGAGCTGAAGAAGCAGACTGGAGATACGATCAAGAGAATAGCCGAATTCTTGGGATGTGGTTT
TATTGAAGAAGAAGAAGTCGGAGGG




Most similar to sp|P52839|FSTL_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P52839|FSTL_ARATH Flavonol sulfotransferase-like OS=Arabidopsis
           thaliana GN=At2g03760 PE=1 SV=2
          Length = 326

 Score =  451 bits (1159), Expect = e-126
 Identities = 216/247 (87%), Positives = 231/247 (93%), Gaps = 1/247 (0%)
 Frame = +1

Query: 82  YLRDEDLTQETRDLISSLPSEKGWLVSQMYQFQGRWHTQALLQGLLQYQKHFEAKDSDII 261
           YL DEDLTQETR LISSLP EKGWLVS++Y+FQG WHTQA+LQG+L  QK FEAKDSDII
Sbjct: 10  YLGDEDLTQETRALISSLPKEKGWLVSEIYEFQGLWHTQAILQGILICQKRFEAKDSDII 69

Query: 262 LVTNPKSGTTWLKALVFSLINRHKFPVSS-GDHPLLVTNPHLLIPFLEGVYYESPNFDFT 438
           LVTNPKSGTTWLKALVF+L+NRHKFPVSS G+HPLLVTNPHLL+PFLEGVYYESP+FDF+
Sbjct: 70  LVTNPKSGTTWLKALVFALLNRHKFPVSSSGNHPLLVTNPHLLVPFLEGVYYESPDFDFS 129

Query: 439 ELPSPRLMNTHISLLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLASQETADYPIE 618
            LPSPRLMNTHIS LSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLA +ETADYPIE
Sbjct: 130 SLPSPRLMNTHISHLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLAPEETADYPIE 189

Query: 619 KAVEAFCQGKFIGGPFWDHVLEYWYASLENPNKVLFVTYEELKKQTGDTIKRIAEFLGCG 798
           KAVEAFC+GKFIGGPFWDH+LEYWYAS ENPNKVLFVTYEELKKQT   +KRIAEFL CG
Sbjct: 190 KAVEAFCEGKFIGGPFWDHILEYWYASRENPNKVLFVTYEELKKQTEVEMKRIAEFLECG 249

Query: 799 FIEEEEV 819
           FIEEEEV
Sbjct: 250 FIEEEEV 256